Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 AC144652.1-201ENST00000609974 1624 ntBASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.73■□□□□ 0.59
SMIM4Q8WVI0 Z98882.1-201ENST00000622160 2253 ntBASIC18.72■□□□□ 0.59
SMIM4Q8WVI0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SMIM4Q8WVI0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.72■□□□□ 0.59
SMIM4Q8WVI0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM4Q8WVI0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SMIM4Q8WVI0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
SMIM4Q8WVI0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM4Q8WVI0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 AC018755.3-202ENST00000596210 929 ntBASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 AC133552.2-201ENST00000619106 1032 ntBASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM4Q8WVI0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.71■□□□□ 0.58
SMIM4Q8WVI0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM4Q8WVI0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 LINC01960-201ENST00000563759 1884 ntBASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM4Q8WVI0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 AF106564.1-201ENST00000607058 2553 ntBASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM4Q8WVI0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM4Q8WVI0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms