Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RAB3IL1Q8TBN0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RAB3IL1Q8TBN0 AC120024.1-201ENST00000562672 995 ntBASIC21.77■■□□□ 1.08
RAB3IL1Q8TBN0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.77■■□□□ 1.08
RAB3IL1Q8TBN0 AC129492.7-201ENST00000622992 756 ntBASIC21.77■■□□□ 1.08
RAB3IL1Q8TBN0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RAB3IL1Q8TBN0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB3IL1Q8TBN0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.07
RAB3IL1Q8TBN0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB3IL1Q8TBN0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB3IL1Q8TBN0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 AC010542.4-201ENST00000563151 1910 ntBASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB3IL1Q8TBN0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 MIR4281-201ENST00000580852 62 ntBASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 FAM99A-202ENST00000538190 1989 ntBASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB3IL1Q8TBN0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 KRT18P24-201ENST00000344739 1156 ntBASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB3IL1Q8TBN0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RAB3IL1Q8TBN0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
RAB3IL1Q8TBN0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.7■■□□□ 1.07
RAB3IL1Q8TBN0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 THA1P-201ENST00000590384 1145 ntBASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 U85056.1-201ENST00000616429 682 ntBASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms