Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 RARRES2P6-201ENST00000567333 442 ntBASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
EFCAB3Q8N7B9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 AC142381.2-201ENST00000566120 298 ntBASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFCAB3Q8N7B9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.54■■□□□ 1.04
EFCAB3Q8N7B9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 PBX2P1-201ENST00000493219 1291 ntBASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFCAB3Q8N7B9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 STK33P1-201ENST00000423835 1218 ntBASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 MIR6722-201ENST00000617286 78 ntBASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.52■■□□□ 1.04
EFCAB3Q8N7B9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
EFCAB3Q8N7B9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 SLC25A24-204ENST00000569674 2357 ntBASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCAB3Q8N7B9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms