Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
VPS52Q8N1B4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 AC105233.4-201ENST00000642045 216 ntBASIC23.7■■□□□ 1.38
VPS52Q8N1B4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS52Q8N1B4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.69■■□□□ 1.38
VPS52Q8N1B4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 ABCB10P4-201ENST00000566803 2184 ntBASIC23.69■■□□□ 1.38
VPS52Q8N1B4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VPS52Q8N1B4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VPS52Q8N1B4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS52Q8N1B4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS52Q8N1B4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS52Q8N1B4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS52Q8N1B4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS52Q8N1B4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VPS52Q8N1B4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.64■■□□□ 1.37
VPS52Q8N1B4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.64■■□□□ 1.37
VPS52Q8N1B4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.64■■□□□ 1.37
VPS52Q8N1B4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VPS52Q8N1B4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS52Q8N1B4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS52Q8N1B4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS52Q8N1B4 AC012676.1-201ENST00000574705 1949 ntBASIC23.63■■□□□ 1.37
VPS52Q8N1B4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS52Q8N1B4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS52Q8N1B4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.63■■□□□ 1.37
VPS52Q8N1B4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms