Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC27.27■■□□□ 1.96
SMC5Q8IY18 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMC5Q8IY18 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SMC5Q8IY18 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC27.27■■□□□ 1.96
SMC5Q8IY18 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMC5Q8IY18 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SMC5Q8IY18 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.27■■□□□ 1.96
SMC5Q8IY18 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
SMC5Q8IY18 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SMC5Q8IY18 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMC5Q8IY18 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMC5Q8IY18 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMC5Q8IY18 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMC5Q8IY18 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
SMC5Q8IY18 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.26■■□□□ 1.95
SMC5Q8IY18 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMC5Q8IY18 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SMC5Q8IY18 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMC5Q8IY18 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.26■■□□□ 1.95
SMC5Q8IY18 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMC5Q8IY18 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.25■■□□□ 1.95
SMC5Q8IY18 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMC5Q8IY18 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMC5Q8IY18 AL356740.2-201ENST00000601559 647 ntBASIC27.25■■□□□ 1.95
SMC5Q8IY18 AL512631.2-201ENST00000604634 923 ntBASIC27.25■■□□□ 1.95
SMC5Q8IY18 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMC5Q8IY18 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC27.25■■□□□ 1.95
SMC5Q8IY18 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMC5Q8IY18 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SMC5Q8IY18 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMC5Q8IY18 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.24■■□□□ 1.95
SMC5Q8IY18 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SMC5Q8IY18 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMC5Q8IY18 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMC5Q8IY18 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.24■■□□□ 1.95
SMC5Q8IY18 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.24■■□□□ 1.95
SMC5Q8IY18 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.24■■□□□ 1.95
SMC5Q8IY18 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
SMC5Q8IY18 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMC5Q8IY18 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
SMC5Q8IY18 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC27.23■■□□□ 1.95
SMC5Q8IY18 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMC5Q8IY18 AC099791.2-201ENST00000605725 427 ntBASIC27.23■■□□□ 1.95
SMC5Q8IY18 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMC5Q8IY18 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMC5Q8IY18 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMC5Q8IY18 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMC5Q8IY18 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMC5Q8IY18 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.22■■□□□ 1.95
SMC5Q8IY18 AL031602.1-201ENST00000633169 911 ntBASIC27.22■■□□□ 1.95
SMC5Q8IY18 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMC5Q8IY18 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.22■■□□□ 1.95
SMC5Q8IY18 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC27.22■■□□□ 1.95
SMC5Q8IY18 AC133637.1-201ENST00000624115 1537 ntBASIC27.21■■□□□ 1.95
SMC5Q8IY18 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMC5Q8IY18 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.21■■□□□ 1.95
SMC5Q8IY18 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SMC5Q8IY18 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMC5Q8IY18 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.21■■□□□ 1.95
SMC5Q8IY18 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SMC5Q8IY18 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
SMC5Q8IY18 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMC5Q8IY18 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.2■■□□□ 1.94
SMC5Q8IY18 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.2■■□□□ 1.94
SMC5Q8IY18 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
SMC5Q8IY18 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
SMC5Q8IY18 pRNA.6-201ENST00000610482 90 ntBASIC27.2■■□□□ 1.94
SMC5Q8IY18 pRNA.5-201ENST00000612139 90 ntBASIC27.2■■□□□ 1.94
SMC5Q8IY18 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMC5Q8IY18 pRNA.11-201ENST00000618423 90 ntBASIC27.2■■□□□ 1.94
SMC5Q8IY18 pRNA.13-201ENST00000619112 90 ntBASIC27.2■■□□□ 1.94
SMC5Q8IY18 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC27.19■■□□□ 1.94
SMC5Q8IY18 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SMC5Q8IY18 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMC5Q8IY18 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMC5Q8IY18 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMC5Q8IY18 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMC5Q8IY18 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
SMC5Q8IY18 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC27.18■■□□□ 1.94
SMC5Q8IY18 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
SMC5Q8IY18 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.18■■□□□ 1.94
SMC5Q8IY18 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMC5Q8IY18 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SMC5Q8IY18 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
SMC5Q8IY18 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMC5Q8IY18 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SMC5Q8IY18 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SMC5Q8IY18 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.17■■□□□ 1.94
SMC5Q8IY18 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.17■■□□□ 1.94
SMC5Q8IY18 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMC5Q8IY18 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMC5Q8IY18 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms