Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.26■□□□□ 0.83
VRK2Q86Y07 CLDN5-201ENST00000403084 2357 ntBASIC20.26■□□□□ 0.83
VRK2Q86Y07 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 AL356740.2-201ENST00000601559 647 ntBASIC20.25■□□□□ 0.83
VRK2Q86Y07 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VRK2Q86Y07 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
VRK2Q86Y07 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.24■□□□□ 0.83
VRK2Q86Y07 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VRK2Q86Y07 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.24■□□□□ 0.83
VRK2Q86Y07 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.24■□□□□ 0.83
VRK2Q86Y07 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VRK2Q86Y07 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
VRK2Q86Y07 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VRK2Q86Y07 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
VRK2Q86Y07 AC006455.2-201ENST00000429931 906 ntBASIC20.24■□□□□ 0.83
VRK2Q86Y07 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.24■□□□□ 0.83
VRK2Q86Y07 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VRK2Q86Y07 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.24■□□□□ 0.83
VRK2Q86Y07 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VRK2Q86Y07 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.23■□□□□ 0.83
VRK2Q86Y07 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.23■□□□□ 0.83
VRK2Q86Y07 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.23■□□□□ 0.83
VRK2Q86Y07 C11orf96-202ENST00000528572 1834 ntBASIC20.23■□□□□ 0.83
VRK2Q86Y07 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.23■□□□□ 0.83
VRK2Q86Y07 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.23■□□□□ 0.83
VRK2Q86Y07 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
VRK2Q86Y07 MIR3621-201ENST00000580529 85 ntBASIC20.23■□□□□ 0.83
VRK2Q86Y07 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.23■□□□□ 0.83
VRK2Q86Y07 AC241377.3-202ENST00000626088 1088 ntBASIC20.23■□□□□ 0.83
VRK2Q86Y07 AC241585.3-202ENST00000628937 1088 ntBASIC20.23■□□□□ 0.83
VRK2Q86Y07 AC245100.8-202ENST00000629247 1058 ntBASIC20.23■□□□□ 0.83
VRK2Q86Y07 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.23■□□□□ 0.83
VRK2Q86Y07 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 AC137767.1-201ENST00000602918 1920 ntBASIC20.23■□□□□ 0.83
VRK2Q86Y07 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VRK2Q86Y07 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VRK2Q86Y07 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VRK2Q86Y07 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VRK2Q86Y07 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VRK2Q86Y07 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VRK2Q86Y07 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VRK2Q86Y07 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.22■□□□□ 0.83
VRK2Q86Y07 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VRK2Q86Y07 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VRK2Q86Y07 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.21■□□□□ 0.83
VRK2Q86Y07 AC099791.2-201ENST00000605725 427 ntBASIC20.21■□□□□ 0.83
VRK2Q86Y07 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VRK2Q86Y07 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
VRK2Q86Y07 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.21■□□□□ 0.83
VRK2Q86Y07 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VRK2Q86Y07 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VRK2Q86Y07 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VRK2Q86Y07 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VRK2Q86Y07 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VRK2Q86Y07 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VRK2Q86Y07 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 pRNA.6-201ENST00000610482 90 ntBASIC20.2■□□□□ 0.82
VRK2Q86Y07 pRNA.5-201ENST00000612139 90 ntBASIC20.2■□□□□ 0.82
VRK2Q86Y07 pRNA.11-201ENST00000618423 90 ntBASIC20.2■□□□□ 0.82
VRK2Q86Y07 pRNA.13-201ENST00000619112 90 ntBASIC20.2■□□□□ 0.82
VRK2Q86Y07 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.2■□□□□ 0.82
VRK2Q86Y07 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms