Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS36Q86VN1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
VPS36Q86VN1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.55■■□□□ 1.36
VPS36Q86VN1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.55■■□□□ 1.36
VPS36Q86VN1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS36Q86VN1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS36Q86VN1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS36Q86VN1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS36Q86VN1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS36Q86VN1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
VPS36Q86VN1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS36Q86VN1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.54■■□□□ 1.36
VPS36Q86VN1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
VPS36Q86VN1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.53■■□□□ 1.36
VPS36Q86VN1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VPS36Q86VN1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.52■■□□□ 1.36
VPS36Q86VN1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 TSPY9P-201ENST00000440215 945 ntBASIC23.52■■□□□ 1.36
VPS36Q86VN1 TSPY11P-201ENST00000442607 1045 ntBASIC23.52■■□□□ 1.36
VPS36Q86VN1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.52■■□□□ 1.36
VPS36Q86VN1 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.52■■□□□ 1.36
VPS36Q86VN1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.52■■□□□ 1.36
VPS36Q86VN1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS36Q86VN1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.35
VPS36Q86VN1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS36Q86VN1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS36Q86VN1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS36Q86VN1 C17orf82-201ENST00000623772 1530 ntBASIC23.51■■□□□ 1.35
VPS36Q86VN1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 AC004687.1-201ENST00000579003 1625 ntBASIC23.51■■□□□ 1.35
VPS36Q86VN1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS36Q86VN1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
VPS36Q86VN1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.5■■□□□ 1.35
VPS36Q86VN1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS36Q86VN1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.5■■□□□ 1.35
VPS36Q86VN1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS36Q86VN1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS36Q86VN1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
VPS36Q86VN1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS36Q86VN1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.5■■□□□ 1.35
VPS36Q86VN1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.5■■□□□ 1.35
VPS36Q86VN1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS36Q86VN1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS36Q86VN1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS36Q86VN1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS36Q86VN1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS36Q86VN1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS36Q86VN1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
VPS36Q86VN1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS36Q86VN1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.49■■□□□ 1.35
VPS36Q86VN1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
VPS36Q86VN1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS36Q86VN1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.48■■□□□ 1.35
VPS36Q86VN1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
VPS36Q86VN1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.48■■□□□ 1.35
VPS36Q86VN1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.48■■□□□ 1.35
VPS36Q86VN1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
VPS36Q86VN1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms