Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.21■■□□□ 1.31
LRRTM3Q86VH5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 AC034268.1-201ENST00000441047 882 ntBASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.2■■□□□ 1.3
LRRTM3Q86VH5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 CCDC92B-201ENST00000575506 885 ntBASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 AC104564.3-201ENST00000582367 638 ntBASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM3Q86VH5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM3Q86VH5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 SMUG1P1-201ENST00000590640 811 ntBASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 OXCT2P1-201ENST00000447263 1535 ntBASIC23.17■■□□□ 1.3
LRRTM3Q86VH5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRTM3Q86VH5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.16■■□□□ 1.3
LRRTM3Q86VH5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.16■■□□□ 1.3
LRRTM3Q86VH5 AC087239.1-201ENST00000622671 572 ntBASIC23.16■■□□□ 1.3
LRRTM3Q86VH5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.16■■□□□ 1.3
LRRTM3Q86VH5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.16■■□□□ 1.3
LRRTM3Q86VH5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRTM3Q86VH5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 TERF1P2-201ENST00000583350 1212 ntBASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.15■■□□□ 1.3
LRRTM3Q86VH5 LINC02228-203ENST00000641970 1355 ntBASIC23.14■■□□□ 1.3
LRRTM3Q86VH5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LRRTM3Q86VH5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
LRRTM3Q86VH5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
LRRTM3Q86VH5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRRTM3Q86VH5 KRT18P5-201ENST00000436075 1291 ntBASIC23.14■■□□□ 1.29
LRRTM3Q86VH5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LRRTM3Q86VH5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LRRTM3Q86VH5 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.14■■□□□ 1.29
LRRTM3Q86VH5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 KRT18P14-201ENST00000534205 1250 ntBASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.13■■□□□ 1.29
LRRTM3Q86VH5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRTM3Q86VH5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms