Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
USP48Q86UV5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP48Q86UV5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP48Q86UV5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
USP48Q86UV5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP48Q86UV5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.84■■□□□ 1.89
USP48Q86UV5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
USP48Q86UV5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
USP48Q86UV5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
USP48Q86UV5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.83■■□□□ 1.89
USP48Q86UV5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.83■■□□□ 1.89
USP48Q86UV5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
USP48Q86UV5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.83■■□□□ 1.89
USP48Q86UV5 AC073111.5-205ENST00000641717 521 ntBASIC26.83■■□□□ 1.89
USP48Q86UV5 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.83■■□□□ 1.89
USP48Q86UV5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
USP48Q86UV5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
USP48Q86UV5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
USP48Q86UV5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
USP48Q86UV5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
USP48Q86UV5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.82■■□□□ 1.88
USP48Q86UV5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
USP48Q86UV5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
USP48Q86UV5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
USP48Q86UV5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
USP48Q86UV5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
USP48Q86UV5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
USP48Q86UV5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
USP48Q86UV5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.81■■□□□ 1.88
USP48Q86UV5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.81■■□□□ 1.88
USP48Q86UV5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
USP48Q86UV5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.81■■□□□ 1.88
USP48Q86UV5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.81■■□□□ 1.88
USP48Q86UV5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
USP48Q86UV5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.81■■□□□ 1.88
USP48Q86UV5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
USP48Q86UV5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
USP48Q86UV5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
USP48Q86UV5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
USP48Q86UV5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
USP48Q86UV5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.8■■□□□ 1.88
USP48Q86UV5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.8■■□□□ 1.88
USP48Q86UV5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.8■■□□□ 1.88
USP48Q86UV5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.8■■□□□ 1.88
USP48Q86UV5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
USP48Q86UV5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.8■■□□□ 1.88
USP48Q86UV5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
USP48Q86UV5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
USP48Q86UV5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
USP48Q86UV5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
USP48Q86UV5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
USP48Q86UV5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.79■■□□□ 1.88
USP48Q86UV5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
USP48Q86UV5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
USP48Q86UV5 AC016769.1-201ENST00000409132 1010 ntBASIC26.79■■□□□ 1.88
USP48Q86UV5 AC137761.2-201ENST00000561729 223 ntBASIC26.79■■□□□ 1.88
USP48Q86UV5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.79■■□□□ 1.88
USP48Q86UV5 AC145350.3-201ENST00000569033 163 ntBASIC26.79■■□□□ 1.88
USP48Q86UV5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.79■■□□□ 1.88
USP48Q86UV5 AC104771.1-201ENST00000603335 964 ntBASIC26.79■■□□□ 1.88
USP48Q86UV5 AL161729.1-201ENST00000604104 1402 ntBASIC26.79■■□□□ 1.88
USP48Q86UV5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.79■■□□□ 1.88
USP48Q86UV5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.79■■□□□ 1.88
USP48Q86UV5 AC079834.2-201ENST00000609776 1949 ntBASIC26.78■■□□□ 1.88
USP48Q86UV5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.78■■□□□ 1.88
USP48Q86UV5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
USP48Q86UV5 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.78■■□□□ 1.88
USP48Q86UV5 AP005435.1-201ENST00000529293 1178 ntBASIC26.78■■□□□ 1.88
USP48Q86UV5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.78■■□□□ 1.88
USP48Q86UV5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
USP48Q86UV5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.77■■□□□ 1.88
USP48Q86UV5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.77■■□□□ 1.88
USP48Q86UV5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.77■■□□□ 1.88
USP48Q86UV5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
USP48Q86UV5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.77■■□□□ 1.88
USP48Q86UV5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.77■■□□□ 1.88
USP48Q86UV5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.77■■□□□ 1.88
USP48Q86UV5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USP48Q86UV5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
USP48Q86UV5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
USP48Q86UV5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
USP48Q86UV5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.76■■□□□ 1.87
USP48Q86UV5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
USP48Q86UV5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.76■■□□□ 1.87
USP48Q86UV5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.76■■□□□ 1.87
USP48Q86UV5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
USP48Q86UV5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
USP48Q86UV5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
USP48Q86UV5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
USP48Q86UV5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.76■■□□□ 1.87
USP48Q86UV5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
USP48Q86UV5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms