Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 AC092296.2-201ENST00000589470 999 ntBASIC18.17■□□□□ 0.5
ZNF546Q86UE3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF546Q86UE3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF546Q86UE3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 AC087742.1-201ENST00000575880 1738 ntBASIC18.15■□□□□ 0.5
ZNF546Q86UE3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 AL022069.1-201ENST00000568025 1636 ntBASIC18.15■□□□□ 0.5
ZNF546Q86UE3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ZNF546Q86UE3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.14■□□□□ 0.5
ZNF546Q86UE3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF546Q86UE3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF546Q86UE3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 ECEL1P2-201ENST00000461596 1295 ntBASIC18.14■□□□□ 0.49
ZNF546Q86UE3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 AC244015.2-201ENST00000616358 1861 ntBASIC18.14■□□□□ 0.49
ZNF546Q86UE3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF546Q86UE3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 ALDH1A3-203ENST00000557963 1670 ntBASIC18.13■□□□□ 0.49
ZNF546Q86UE3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 ABHD17AP4-201ENST00000411545 909 ntBASIC18.13■□□□□ 0.49
ZNF546Q86UE3 AC093536.1-201ENST00000569153 554 ntBASIC18.13■□□□□ 0.49
ZNF546Q86UE3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 AL391422.3-201ENST00000603791 2761 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms