Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC139530.1-201ENST00000575312 1977 ntBASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 AC005229.4-201ENST00000610085 2198 ntBASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
FOXR1Q6PIV2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
FOXR1Q6PIV2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 AL117332.1-201ENST00000622628 974 ntBASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.69■■□□□ 1.22
FOXR1Q6PIV2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR1Q6PIV2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
FOXR1Q6PIV2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 AL356740.2-201ENST00000601559 647 ntBASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 MIR6724-1-201ENST00000616420 92 ntBASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 MIR6724-2-201ENST00000616483 92 ntBASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 MIR6724-4-201ENST00000617390 92 ntBASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 MIR6724-3-201ENST00000622482 92 ntBASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR1Q6PIV2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms