Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.27■□□□□ 0.83
H3F3CQ6NXT2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
H3F3CQ6NXT2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 AC010141.3-201ENST00000456659 717 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4L2-201ENST00000561772 1275 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4L6-201ENST00000626483 1275 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4L1-201ENST00000627662 1275 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4L8-201ENST00000629013 1275 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4L3-201ENST00000630187 1275 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4L7-201ENST00000630678 1275 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DUX4L5-201ENST00000630834 1275 ntBASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.26■□□□□ 0.83
H3F3CQ6NXT2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3F3CQ6NXT2 AC087239.1-201ENST00000622671 572 ntBASIC20.25■□□□□ 0.83
H3F3CQ6NXT2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.25■□□□□ 0.83
H3F3CQ6NXT2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.25■□□□□ 0.83
H3F3CQ6NXT2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 TERF1P2-201ENST00000583350 1212 ntBASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
H3F3CQ6NXT2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 LINC02228-203ENST00000641970 1355 ntBASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 CCDC92B-201ENST00000575506 885 ntBASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3F3CQ6NXT2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
H3F3CQ6NXT2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 KRT18P5-201ENST00000436075 1291 ntBASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H3F3CQ6NXT2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3F3CQ6NXT2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.2■□□□□ 0.82
H3F3CQ6NXT2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms