Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM53AQ6NSI3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 MIR3621-201ENST00000580529 85 ntBASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 LINC01960-201ENST00000563759 1884 ntBASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FAM53AQ6NSI3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 CLDN5-201ENST00000403084 2357 ntBASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 AC099791.2-201ENST00000605725 427 ntBASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 AC009086.3-201ENST00000623486 1008 ntBASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.12■□□□□ 0.49
FAM53AQ6NSI3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 AL356740.2-201ENST00000601559 647 ntBASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM53AQ6NSI3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 AL512631.2-201ENST00000604634 923 ntBASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM53AQ6NSI3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM53AQ6NSI3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms