Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL6Q6ICC9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL6Q6ICC9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL6Q6ICC9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL6Q6ICC9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL6Q6ICC9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL6Q6ICC9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL6Q6ICC9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 AC022517.1-201ENST00000592429 346 ntBASIC19.74■□□□□ 0.75
RTL6Q6ICC9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 AC079630.1-202ENST00000618127 1840 ntBASIC19.74■□□□□ 0.75
RTL6Q6ICC9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL6Q6ICC9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 IKBKGP1-201ENST00000612193 1073 ntBASIC19.73■□□□□ 0.75
RTL6Q6ICC9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTL6Q6ICC9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 CCDC92B-201ENST00000575506 885 ntBASIC19.72■□□□□ 0.75
RTL6Q6ICC9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL6Q6ICC9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTL6Q6ICC9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL6Q6ICC9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.69■□□□□ 0.74
RTL6Q6ICC9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL6Q6ICC9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 ABCB10P4-201ENST00000566803 2184 ntBASIC19.68■□□□□ 0.74
RTL6Q6ICC9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 TERF1P2-201ENST00000583350 1212 ntBASIC19.68■□□□□ 0.74
RTL6Q6ICC9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 AC105233.4-201ENST00000642045 216 ntBASIC19.68■□□□□ 0.74
RTL6Q6ICC9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL6Q6ICC9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms