Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.66■□□□□ 0.58
ARFGEF3Q5TH69 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARFGEF3Q5TH69 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 AC092437.1-201ENST00000624794 1048 ntBASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 ANOS2P-203ENST00000472227 1816 ntBASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.65■□□□□ 0.58
ARFGEF3Q5TH69 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARFGEF3Q5TH69 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.64■□□□□ 0.58
ARFGEF3Q5TH69 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ARFGEF3Q5TH69 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 AC068587.7-201ENST00000641602 218 ntBASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ARFGEF3Q5TH69 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARFGEF3Q5TH69 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 LINC01960-201ENST00000563759 1884 ntBASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 AC090192.1-201ENST00000517740 490 ntBASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARFGEF3Q5TH69 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms