Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATPAF1Q5TC12 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 MIR3621-201ENST00000580529 85 ntBASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 AL356740.2-201ENST00000601559 647 ntBASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATPAF1Q5TC12 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATPAF1Q5TC12 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
ATPAF1Q5TC12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
ATPAF1Q5TC12 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 AL117332.1-201ENST00000622628 974 ntBASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATPAF1Q5TC12 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 SLC25A24-204ENST00000569674 2357 ntBASIC18.88■□□□□ 0.61
ATPAF1Q5TC12 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 C11orf96-202ENST00000528572 1834 ntBASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATPAF1Q5TC12 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 AC139530.1-201ENST00000575312 1977 ntBASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.86■□□□□ 0.61
ATPAF1Q5TC12 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 AC092053.2-201ENST00000640557 1818 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms