Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDCA8Q53HL2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDCA8Q53HL2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDCA8Q53HL2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDCA8Q53HL2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDCA8Q53HL2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.34■■■□□ 2.45
CDCA8Q53HL2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC30.34■■■□□ 2.45
CDCA8Q53HL2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30.33■■■□□ 2.45
CDCA8Q53HL2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDCA8Q53HL2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 YBX1P1-201ENST00000445822 960 ntBASIC30.31■■■□□ 2.44
CDCA8Q53HL2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CDCA8Q53HL2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.31■■■□□ 2.44
CDCA8Q53HL2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CDCA8Q53HL2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDCA8Q53HL2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.3■■■□□ 2.44
CDCA8Q53HL2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
CDCA8Q53HL2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
CDCA8Q53HL2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 AC123595.1-201ENST00000440769 1046 ntBASIC30.29■■■□□ 2.44
CDCA8Q53HL2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDCA8Q53HL2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.28■■■□□ 2.44
CDCA8Q53HL2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.27■■■□□ 2.44
CDCA8Q53HL2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CDCA8Q53HL2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.26■■■□□ 2.44
CDCA8Q53HL2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDCA8Q53HL2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDCA8Q53HL2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CDCA8Q53HL2 SMUG1P1-201ENST00000590640 811 ntBASIC30.26■■■□□ 2.43
CDCA8Q53HL2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.26■■■□□ 2.43
CDCA8Q53HL2 MIR5787-201ENST00000611784 55 ntBASIC30.26■■■□□ 2.43
CDCA8Q53HL2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
CDCA8Q53HL2 MIR6084-201ENST00000622012 110 ntBASIC30.26■■■□□ 2.43
CDCA8Q53HL2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDCA8Q53HL2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC30.26■■■□□ 2.43
CDCA8Q53HL2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDCA8Q53HL2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDCA8Q53HL2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CDCA8Q53HL2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC30.25■■■□□ 2.43
CDCA8Q53HL2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.25■■■□□ 2.43
CDCA8Q53HL2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.25■■■□□ 2.43
CDCA8Q53HL2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDCA8Q53HL2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CDCA8Q53HL2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
CDCA8Q53HL2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms