Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM60Q495X7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM60Q495X7 AC004687.1-201ENST00000579003 1625 ntBASIC24.31■■□□□ 1.48
TRIM60Q495X7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TRIM60Q495X7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM60Q495X7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
TRIM60Q495X7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM60Q495X7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM60Q495X7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM60Q495X7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM60Q495X7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.3■■□□□ 1.48
TRIM60Q495X7 DUX4L16-201ENST00000555130 1264 ntBASIC24.3■■□□□ 1.48
TRIM60Q495X7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.3■■□□□ 1.48
TRIM60Q495X7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.3■■□□□ 1.48
TRIM60Q495X7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.3■■□□□ 1.48
TRIM60Q495X7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.3■■□□□ 1.48
TRIM60Q495X7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM60Q495X7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM60Q495X7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TRIM60Q495X7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM60Q495X7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.29■■□□□ 1.48
TRIM60Q495X7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TRIM60Q495X7 AC010141.3-201ENST00000456659 717 ntBASIC24.29■■□□□ 1.48
TRIM60Q495X7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM60Q495X7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM60Q495X7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM60Q495X7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM60Q495X7 AC007322.1-201ENST00000426983 750 ntBASIC24.28■■□□□ 1.48
TRIM60Q495X7 FAM201B-201ENST00000458407 597 ntBASIC24.28■■□□□ 1.48
TRIM60Q495X7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.28■■□□□ 1.48
TRIM60Q495X7 AC087239.1-201ENST00000622671 572 ntBASIC24.28■■□□□ 1.48
TRIM60Q495X7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM60Q495X7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.28■■□□□ 1.48
TRIM60Q495X7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
TRIM60Q495X7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM60Q495X7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 SLC29A4P1-201ENST00000398760 971 ntBASIC24.27■■□□□ 1.48
TRIM60Q495X7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 AC069152.1-201ENST00000438030 544 ntBASIC24.27■■□□□ 1.48
TRIM60Q495X7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 AC093827.2-201ENST00000512654 315 ntBASIC24.27■■□□□ 1.48
TRIM60Q495X7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 AC104187.1-201ENST00000607510 612 ntBASIC24.27■■□□□ 1.48
TRIM60Q495X7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.27■■□□□ 1.48
TRIM60Q495X7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM60Q495X7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM60Q495X7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM60Q495X7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM60Q495X7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.26■■□□□ 1.47
TRIM60Q495X7 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.26■■□□□ 1.47
TRIM60Q495X7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.26■■□□□ 1.47
TRIM60Q495X7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.26■■□□□ 1.47
TRIM60Q495X7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM60Q495X7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM60Q495X7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM60Q495X7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM60Q495X7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TRIM60Q495X7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM60Q495X7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM60Q495X7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM60Q495X7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM60Q495X7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 UBE2DNL-204ENST00000602536 740 ntBASIC24.24■■□□□ 1.47
TRIM60Q495X7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM60Q495X7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM60Q495X7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
TRIM60Q495X7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.23■■□□□ 1.47
TRIM60Q495X7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM60Q495X7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TRIM60Q495X7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.23■■□□□ 1.47
TRIM60Q495X7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM60Q495X7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.23■■□□□ 1.47
TRIM60Q495X7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
TRIM60Q495X7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM60Q495X7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.22■■□□□ 1.47
TRIM60Q495X7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms