Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 ARX1YDR101C 1782 nt3.51□□□□□ -1.85
RRP40Q08285 SIR1YKR101W 1965 nt3.51□□□□□ -1.85
RRP40Q08285 YDR271CYDR271C 372 nt3.51□□□□□ -1.85
RRP40Q08285 SUP56tL(CAA)A 82 nt3.51□□□□□ -1.85
RRP40Q08285 SUP53tL(CAA)C 82 nt3.51□□□□□ -1.85
RRP40Q08285 tL(CAA)DtL(CAA)D 82 nt3.51□□□□□ -1.85
RRP40Q08285 tL(CAA)G1tL(CAA)G1 82 nt3.51□□□□□ -1.85
RRP40Q08285 SUP54tL(CAA)G2 82 nt3.51□□□□□ -1.85
RRP40Q08285 tL(CAA)G3tL(CAA)G3 82 nt3.51□□□□□ -1.85
RRP40Q08285 tL(CAA)KtL(CAA)K 82 nt3.51□□□□□ -1.85
RRP40Q08285 tL(CAA)LtL(CAA)L 82 nt3.51□□□□□ -1.85
RRP40Q08285 tL(CAA)MtL(CAA)M 82 nt3.51□□□□□ -1.85
RRP40Q08285 tL(CAA)NtL(CAA)N 82 nt3.51□□□□□ -1.85
RRP40Q08285 MRS3YJL133W 945 nt3.51□□□□□ -1.85
RRP40Q08285 UPS2YLR168C 693 nt3.51□□□□□ -1.85
RRP40Q08285 PNG1YPL096W 1092 nt3.51□□□□□ -1.85
RRP40Q08285 CMR3YPR013C 954 nt3.51□□□□□ -1.85
RRP40Q08285 CNA1YLR433C 1662 nt3.51□□□□□ -1.85
RRP40Q08285 HPR1YDR138W 2259 nt3.51□□□□□ -1.85
RRP40Q08285 IOC4YMR044W 1428 nt3.51□□□□□ -1.85
RRP40Q08285 HOS2YGL194C 1359 nt3.51□□□□□ -1.85
RRP40Q08285 GCD1YOR260W 1737 nt3.5□□□□□ -1.85
RRP40Q08285 COS7YDL248W 1152 nt3.5□□□□□ -1.85
RRP40Q08285 OTU1YFL044C 906 nt3.5□□□□□ -1.85
RRP40Q08285 ERV14YGL054C 417 nt3.5□□□□□ -1.85
RRP40Q08285 YGL108CYGL108C 423 nt3.5□□□□□ -1.85
RRP40Q08285 YGR015CYGR015C 987 nt3.5□□□□□ -1.85
RRP40Q08285 AIR1YIL079C 1083 nt3.5□□□□□ -1.85
RRP40Q08285 YIL152WYIL152W 708 nt3.5□□□□□ -1.85
RRP40Q08285 COS5YJR161C 1152 nt3.5□□□□□ -1.85
RRP40Q08285 COX19YLL018C-A 297 nt3.5□□□□□ -1.85
RRP40Q08285 TRM13YOL125W 1431 nt3.5□□□□□ -1.85
RRP40Q08285 BCH2YKR027W 2298 nt3.5□□□□□ -1.85
RRP40Q08285 BOI2YER114C 3123 nt3.49□□□□□ -1.85
RRP40Q08285 ELM1YKL048C 1923 nt3.49□□□□□ -1.85
RRP40Q08285 MOB2YFL034C-B 864 nt3.49□□□□□ -1.85
RRP40Q08285 YLL017WYLL017W 312 nt3.49□□□□□ -1.85
RRP40Q08285 PFA4YOL003C 1137 nt3.49□□□□□ -1.85
RRP40Q08285 ANT1YPR128C 987 nt3.49□□□□□ -1.85
RRP40Q08285 POF1YCL047C 777 nt3.49□□□□□ -1.85
RRP40Q08285 DHR2YKL078W 2208 nt3.49□□□□□ -1.85
RRP40Q08285 PEP7YDR323C 1548 nt3.49□□□□□ -1.85
RRP40Q08285 CDC45YLR103C 1953 nt3.49□□□□□ -1.85
RRP40Q08285 HEF3YNL014W 3135 nt3.48□□□□□ -1.85
RRP40Q08285 GPB1YOR371C 2694 nt3.48□□□□□ -1.85
RRP40Q08285 PFA5YDR459C 1125 nt3.48□□□□□ -1.85
RRP40Q08285 SGN1YIR001C 753 nt3.48□□□□□ -1.85
RRP40Q08285 YLR154W-BYLR154W-B 165 nt3.48□□□□□ -1.85
RRP40Q08285 HMX1YLR205C 954 nt3.48□□□□□ -1.85
RRP40Q08285 ATG8YBL078C 354 nt3.48□□□□□ -1.85
RRP40Q08285 SPT6YGR116W 4356 nt3.48□□□□□ -1.85
RRP40Q08285 RKM3YBR030W 1659 nt3.47□□□□□ -1.85
RRP40Q08285 HOM2YDR158W 1098 nt3.47□□□□□ -1.85
RRP40Q08285 PHM6YDR281C 315 nt3.47□□□□□ -1.85
RRP40Q08285 YGR051CYGR051C 324 nt3.47□□□□□ -1.85
RRP40Q08285 PDX1YGR193C 1233 nt3.47□□□□□ -1.85
RRP40Q08285 AIM22YJL046W 1230 nt3.47□□□□□ -1.85
RRP40Q08285 MMM1YLL006W 1281 nt3.47□□□□□ -1.85
RRP40Q08285 PAM18YLR008C 507 nt3.47□□□□□ -1.85
RRP40Q08285 YLR049CYLR049C 1287 nt3.47□□□□□ -1.85
RRP40Q08285 GLO4YOR040W 858 nt3.47□□□□□ -1.85
RRP40Q08285 OSW1YOR255W 837 nt3.47□□□□□ -1.85
RRP40Q08285 RDS1YCR106W 2499 nt3.47□□□□□ -1.85
RRP40Q08285 NAM9YNL137C 1461 nt3.47□□□□□ -1.85
RRP40Q08285 ECM16YMR128W 3804 nt3.46□□□□□ -1.86
RRP40Q08285 PTR3YFR029W 2037 nt3.46□□□□□ -1.86
RRP40Q08285 YOR022CYOR022C 2148 nt3.46□□□□□ -1.86
RRP40Q08285 COP1YDL145C 3606 nt3.46□□□□□ -1.86
RRP40Q08285 YDL071CYDL071C 375 nt3.46□□□□□ -1.86
RRP40Q08285 SLX8YER116C 825 nt3.46□□□□□ -1.86
RRP40Q08285 YHB1YGR234W 1200 nt3.46□□□□□ -1.86
RRP40Q08285 PIR3YKL163W 978 nt3.46□□□□□ -1.86
RRP40Q08285 snR17asnR17a 333 nt3.46□□□□□ -1.86
RRP40Q08285 NSP1YJL041W 2472 nt3.46□□□□□ -1.86
RRP40Q08285 APL4YPR029C 2499 nt3.46□□□□□ -1.86
RRP40Q08285 PHO87YCR037C 2772 nt3.45□□□□□ -1.86
RRP40Q08285 AAD3YCR107W 1092 nt3.45□□□□□ -1.86
RRP40Q08285 CDC8YJR057W 651 nt3.45□□□□□ -1.86
RRP40Q08285 YLR402WYLR402W 192 nt3.45□□□□□ -1.86
RRP40Q08285 RAD26YJR035W 3258 nt3.45□□□□□ -1.86
RRP40Q08285 PUF2YPR042C 3228 nt3.45□□□□□ -1.86
RRP40Q08285 ALR2YFL050C 2577 nt3.45□□□□□ -1.86
RRP40Q08285 MIH1YMR036C 1665 nt3.44□□□□□ -1.86
RRP40Q08285 MNT4YNR059W 1743 nt3.44□□□□□ -1.86
RRP40Q08285 APM1YPL259C 1428 nt3.44□□□□□ -1.86
RRP40Q08285 GLO3YER122C 1482 nt3.43□□□□□ -1.86
RRP40Q08285 SPT10YJL127C 1923 nt3.43□□□□□ -1.86
RRP40Q08285 YDR282CYDR282C 1245 nt3.43□□□□□ -1.86
RRP40Q08285 MMS2YGL087C 414 nt3.43□□□□□ -1.86
RRP40Q08285 YGK3YOL128C 1128 nt3.43□□□□□ -1.86
RRP40Q08285 IDH2YOR136W 1110 nt3.43□□□□□ -1.86
RRP40Q08285 NPL4YBR170C 1743 nt3.43□□□□□ -1.86
RRP40Q08285 YLR345WYLR345W 1530 nt3.43□□□□□ -1.86
RRP40Q08285 ALE1YOR175C 1860 nt3.43□□□□□ -1.86
RRP40Q08285 KRI1YNL308C 1776 nt3.43□□□□□ -1.86
RRP40Q08285 NUP159YIL115C 4383 nt3.42□□□□□ -1.86
RRP40Q08285 SWP82YFL049W 1872 nt3.42□□□□□ -1.86
RRP40Q08285 MSN4YKL062W 1893 nt3.42□□□□□ -1.86
RRP40Q08285 TRX3YCR083W 384 nt3.42□□□□□ -1.86
RRP40Q08285 FAD1YDL045C 921 nt3.42□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms