Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NKX6-1P78426 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NKX6-1P78426 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX6-1P78426 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX6-1P78426 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX6-1P78426 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX6-1P78426 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-1P78426 AC004911.1-201ENST00000416316 871 ntBASIC19.19■□□□□ 0.66
NKX6-1P78426 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-1P78426 AL031602.1-201ENST00000633169 911 ntBASIC19.19■□□□□ 0.66
NKX6-1P78426 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-1P78426 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-1P78426 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX6-1P78426 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-1P78426 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX6-1P78426 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-1P78426 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NKX6-1P78426 ID1-201ENST00000376105 1233 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX6-1P78426 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.18■□□□□ 0.66
NKX6-1P78426 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX6-1P78426 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4L2-201ENST00000561772 1275 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.18■□□□□ 0.66
NKX6-1P78426 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.18■□□□□ 0.66
NKX6-1P78426 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
NKX6-1P78426 AC092437.1-201ENST00000624794 1048 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4L6-201ENST00000626483 1275 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4L1-201ENST00000627662 1275 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4L8-201ENST00000629013 1275 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4L3-201ENST00000630187 1275 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4L7-201ENST00000630678 1275 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 DUX4L5-201ENST00000630834 1275 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-1P78426 TSPY26P-201ENST00000476365 1326 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.18■□□□□ 0.66
NKX6-1P78426 PKD1P6-201ENST00000343738 4769 ntBASIC19.18■□□□□ 0.66
NKX6-1P78426 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-1P78426 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-1P78426 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-1P78426 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX6-1P78426 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX6-1P78426 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NKX6-1P78426 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.17■□□□□ 0.66
NKX6-1P78426 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX6-1P78426 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NKX6-1P78426 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX6-1P78426 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NKX6-1P78426 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.17■□□□□ 0.66
NKX6-1P78426 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.17■□□□□ 0.66
NKX6-1P78426 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.17■□□□□ 0.66
NKX6-1P78426 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.17■□□□□ 0.66
NKX6-1P78426 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.17■□□□□ 0.66
NKX6-1P78426 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.17■□□□□ 0.66
NKX6-1P78426 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-1P78426 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX6-1P78426 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-1P78426 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-1P78426 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-1P78426 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-1P78426 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.16■□□□□ 0.66
NKX6-1P78426 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.16■□□□□ 0.66
NKX6-1P78426 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NKX6-1P78426 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NKX6-1P78426 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.16■□□□□ 0.66
NKX6-1P78426 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-1P78426 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX6-1P78426 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-1P78426 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NKX6-1P78426 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
NKX6-1P78426 AC133637.1-201ENST00000624115 1537 ntBASIC19.15■□□□□ 0.66
NKX6-1P78426 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NKX6-1P78426 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.15■□□□□ 0.66
NKX6-1P78426 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NKX6-1P78426 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.15■□□□□ 0.66
NKX6-1P78426 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
NKX6-1P78426 AL358852.1-201ENST00000623174 1268 ntBASIC19.15■□□□□ 0.66
NKX6-1P78426 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
NKX6-1P78426 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NKX6-1P78426 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.15■□□□□ 0.66
NKX6-1P78426 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-1P78426 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NKX6-1P78426 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NKX6-1P78426 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-1P78426 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-1P78426 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms