Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.78■□□□□ 0.92
WNT3P56703 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3P56703 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
WNT3P56703 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3P56703 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3P56703 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
WNT3P56703 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3P56703 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3P56703 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.78■□□□□ 0.92
WNT3P56703 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.78■□□□□ 0.92
WNT3P56703 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.78■□□□□ 0.92
WNT3P56703 MIR6724-1-201ENST00000616420 92 ntBASIC20.78■□□□□ 0.92
WNT3P56703 MIR6724-2-201ENST00000616483 92 ntBASIC20.78■□□□□ 0.92
WNT3P56703 MIR6724-4-201ENST00000617390 92 ntBASIC20.78■□□□□ 0.92
WNT3P56703 MIR6724-3-201ENST00000622482 92 ntBASIC20.78■□□□□ 0.92
WNT3P56703 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3P56703 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3P56703 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
WNT3P56703 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
WNT3P56703 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.77■□□□□ 0.92
WNT3P56703 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.77■□□□□ 0.92
WNT3P56703 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3P56703 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
WNT3P56703 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3P56703 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.76■□□□□ 0.91
WNT3P56703 AC007375.3-201ENST00000600936 2314 ntBASIC20.76■□□□□ 0.91
WNT3P56703 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.76■□□□□ 0.91
WNT3P56703 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3P56703 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3P56703 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3P56703 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3P56703 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.76■□□□□ 0.91
WNT3P56703 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3P56703 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
WNT3P56703 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.75■□□□□ 0.91
WNT3P56703 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3P56703 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.75■□□□□ 0.91
WNT3P56703 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.75■□□□□ 0.91
WNT3P56703 AC019069.1-201ENST00000610008 1333 ntBASIC20.75■□□□□ 0.91
WNT3P56703 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3P56703 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3P56703 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3P56703 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3P56703 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
WNT3P56703 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.74■□□□□ 0.91
WNT3P56703 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.74■□□□□ 0.91
WNT3P56703 CA15P2-201ENST00000611168 834 ntBASIC20.74■□□□□ 0.91
WNT3P56703 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3P56703 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
WNT3P56703 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3P56703 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
WNT3P56703 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
WNT3P56703 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 AL136116.3-201ENST00000402907 1138 ntBASIC20.73■□□□□ 0.91
WNT3P56703 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.73■□□□□ 0.91
WNT3P56703 MIR3621-201ENST00000580529 85 ntBASIC20.73■□□□□ 0.91
WNT3P56703 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
WNT3P56703 AL499627.2-201ENST00000606283 725 ntBASIC20.73■□□□□ 0.91
WNT3P56703 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.73■□□□□ 0.91
WNT3P56703 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3P56703 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3P56703 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.72■□□□□ 0.91
WNT3P56703 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.72■□□□□ 0.91
WNT3P56703 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
WNT3P56703 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3P56703 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.72■□□□□ 0.91
WNT3P56703 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3P56703 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3P56703 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.72■□□□□ 0.91
WNT3P56703 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.72■□□□□ 0.91
WNT3P56703 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.72■□□□□ 0.91
WNT3P56703 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.72■□□□□ 0.91
WNT3P56703 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3P56703 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
WNT3P56703 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3P56703 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.71■□□□□ 0.91
WNT3P56703 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3P56703 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3P56703 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3P56703 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.71■□□□□ 0.91
WNT3P56703 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.71■□□□□ 0.91
WNT3P56703 MIR4466-201ENST00000606121 54 ntBASIC20.71■□□□□ 0.91
WNT3P56703 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
WNT3P56703 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3P56703 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms