Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TSPY26P-201ENST00000476365 1326 ntBASIC24.18■■□□□ 1.46
PEX3P56589 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.18■■□□□ 1.46
PEX3P56589 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.18■■□□□ 1.46
PEX3P56589 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.18■■□□□ 1.46
PEX3P56589 ZNRF2P3-201ENST00000424200 374 ntBASIC24.18■■□□□ 1.46
PEX3P56589 IGHV3-19-201ENST00000521488 291 ntBASIC24.18■■□□□ 1.46
PEX3P56589 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PEX3P56589 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PEX3P56589 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
PEX3P56589 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PEX3P56589 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PEX3P56589 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PEX3P56589 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PEX3P56589 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PEX3P56589 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PEX3P56589 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PEX3P56589 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PEX3P56589 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.17■■□□□ 1.46
PEX3P56589 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.17■■□□□ 1.46
PEX3P56589 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.17■■□□□ 1.46
PEX3P56589 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.17■■□□□ 1.46
PEX3P56589 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.17■■□□□ 1.46
PEX3P56589 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PEX3P56589 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PEX3P56589 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PEX3P56589 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.16■■□□□ 1.46
PEX3P56589 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.16■■□□□ 1.46
PEX3P56589 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.16■■□□□ 1.46
PEX3P56589 AC068587.7-201ENST00000641602 218 ntBASIC24.16■■□□□ 1.46
PEX3P56589 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PEX3P56589 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.16■■□□□ 1.46
PEX3P56589 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.16■■□□□ 1.46
PEX3P56589 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PEX3P56589 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.15■■□□□ 1.46
PEX3P56589 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.15■■□□□ 1.46
PEX3P56589 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
PEX3P56589 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PEX3P56589 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.15■■□□□ 1.46
PEX3P56589 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.15■■□□□ 1.46
PEX3P56589 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PEX3P56589 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.14■■□□□ 1.46
PEX3P56589 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PEX3P56589 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.14■■□□□ 1.46
PEX3P56589 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PEX3P56589 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.14■■□□□ 1.45
PEX3P56589 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.14■■□□□ 1.45
PEX3P56589 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PEX3P56589 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.13■■□□□ 1.45
PEX3P56589 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PEX3P56589 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PEX3P56589 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PEX3P56589 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.13■■□□□ 1.45
PEX3P56589 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PEX3P56589 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.13■■□□□ 1.45
PEX3P56589 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PEX3P56589 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PEX3P56589 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PEX3P56589 AC087742.1-201ENST00000575880 1738 ntBASIC24.13■■□□□ 1.45
PEX3P56589 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PEX3P56589 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PEX3P56589 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.12■■□□□ 1.45
PEX3P56589 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PEX3P56589 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.12■■□□□ 1.45
PEX3P56589 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PEX3P56589 AC010141.3-201ENST00000456659 717 ntBASIC24.12■■□□□ 1.45
PEX3P56589 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PEX3P56589 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PEX3P56589 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.12■■□□□ 1.45
PEX3P56589 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.12■■□□□ 1.45
PEX3P56589 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PEX3P56589 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.11■■□□□ 1.45
PEX3P56589 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PEX3P56589 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PEX3P56589 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.11■■□□□ 1.45
PEX3P56589 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.11■■□□□ 1.45
PEX3P56589 AC087239.1-201ENST00000622671 572 ntBASIC24.11■■□□□ 1.45
PEX3P56589 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PEX3P56589 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
PEX3P56589 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.1■■□□□ 1.45
PEX3P56589 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PEX3P56589 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PEX3P56589 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PEX3P56589 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PEX3P56589 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PEX3P56589 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms