Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH12P55289 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDH12P55289 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CDH12P55289 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDH12P55289 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.35■□□□□ 0.85
CDH12P55289 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.35■□□□□ 0.85
CDH12P55289 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH12P55289 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH12P55289 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDH12P55289 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 MIR4787-201ENST00000607364 84 ntBASIC20.34■□□□□ 0.85
CDH12P55289 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH12P55289 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH12P55289 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CDH12P55289 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH12P55289 AC239859.2-201ENST00000444165 318 ntBASIC20.33■□□□□ 0.85
CDH12P55289 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH12P55289 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH12P55289 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH12P55289 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH12P55289 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH12P55289 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CDH12P55289 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH12P55289 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH12P55289 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH12P55289 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH12P55289 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH12P55289 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH12P55289 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH12P55289 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH12P55289 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH12P55289 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH12P55289 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDH12P55289 MTDHP2-201ENST00000601468 714 ntBASIC20.32■□□□□ 0.84
CDH12P55289 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH12P55289 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH12P55289 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH12P55289 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH12P55289 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CDH12P55289 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH12P55289 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH12P55289 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH12P55289 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH12P55289 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH12P55289 AC009299.2-201ENST00000482477 511 ntBASIC20.31■□□□□ 0.84
CDH12P55289 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH12P55289 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH12P55289 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH12P55289 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 LINC01529-204ENST00000636474 1715 ntBASIC20.3■□□□□ 0.84
CDH12P55289 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH12P55289 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDH12P55289 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 AL451085.2-201ENST00000605085 799 ntBASIC20.3■□□□□ 0.84
CDH12P55289 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH12P55289 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH12P55289 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH12P55289 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH12P55289 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH12P55289 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH12P55289 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDH12P55289 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDH12P55289 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH12P55289 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH12P55289 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH12P55289 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.29■□□□□ 0.84
CDH12P55289 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH12P55289 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH12P55289 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH12P55289 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH12P55289 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH12P55289 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDH12P55289 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
CDH12P55289 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDH12P55289 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.28■□□□□ 0.84
CDH12P55289 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
CDH12P55289 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.28■□□□□ 0.84
CDH12P55289 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.28■□□□□ 0.84
CDH12P55289 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH12P55289 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH12P55289 FP325331.1-202ENST00000623531 1380 ntBASIC20.28■□□□□ 0.84
CDH12P55289 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms