Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 COP1YDL145C 3606 nt3.76□□□□□ -1.81
YNL040WP53960 NFI1YOR156C 2181 nt3.76□□□□□ -1.81
YNL040WP53960 CNA1YLR433C 1662 nt3.76□□□□□ -1.81
YNL040WP53960 YOL019WYOL019W 1656 nt3.76□□□□□ -1.81
YNL040WP53960 YER067C-AYER067C-A 324 nt3.76□□□□□ -1.81
YNL040WP53960 OTU1YFL044C 906 nt3.76□□□□□ -1.81
YNL040WP53960 YGR079WYGR079W 1113 nt3.76□□□□□ -1.81
YNL040WP53960 MRT4YKL009W 711 nt3.76□□□□□ -1.81
YNL040WP53960 YPT7YML001W 627 nt3.76□□□□□ -1.81
YNL040WP53960 GLO4YOR040W 858 nt3.76□□□□□ -1.81
YNL040WP53960 YPR015CYPR015C 744 nt3.76□□□□□ -1.81
YNL040WP53960 STU1YBL034C 4542 nt3.76□□□□□ -1.81
YNL040WP53960 ALR2YFL050C 2577 nt3.76□□□□□ -1.81
YNL040WP53960 BUD27YFL023W 2391 nt3.76□□□□□ -1.81
YNL040WP53960 RDH54YBR073W 2877 nt3.76□□□□□ -1.81
YNL040WP53960 SPT10YJL127C 1923 nt3.76□□□□□ -1.81
YNL040WP53960 ARO9YHR137W 1542 nt3.75□□□□□ -1.81
YNL040WP53960 YDR282CYDR282C 1245 nt3.75□□□□□ -1.81
YNL040WP53960 MRM2YGL136C 963 nt3.75□□□□□ -1.81
YNL040WP53960 AUR1YKL004W 1206 nt3.75□□□□□ -1.81
YNL040WP53960 MET16YPR167C 786 nt3.75□□□□□ -1.81
YNL040WP53960 MRPS9YBR146W 837 nt3.75□□□□□ -1.81
YNL040WP53960 DER1YBR201W 636 nt3.75□□□□□ -1.81
YNL040WP53960 OM14YBR230C 405 nt3.75□□□□□ -1.81
YNL040WP53960 TED1YIL039W 1422 nt3.75□□□□□ -1.81
YNL040WP53960 PHO87YCR037C 2772 nt3.74□□□□□ -1.81
YNL040WP53960 MUP3YHL036W 1641 nt3.74□□□□□ -1.81
YNL040WP53960 YDL071CYDL071C 375 nt3.74□□□□□ -1.81
YNL040WP53960 MMS21YEL019C 804 nt3.74□□□□□ -1.81
YNL040WP53960 CHD1YER164W 4407 nt3.74□□□□□ -1.81
YNL040WP53960 ERV14YGL054C 417 nt3.74□□□□□ -1.81
YNL040WP53960 SGN1YIR001C 753 nt3.74□□□□□ -1.81
YNL040WP53960 DAN1YJR150C 897 nt3.74□□□□□ -1.81
YNL040WP53960 YKR075CYKR075C 924 nt3.74□□□□□ -1.81
YNL040WP53960 SRP40YKR092C 1221 nt3.74□□□□□ -1.81
YNL040WP53960 YLR402WYLR402W 192 nt3.74□□□□□ -1.81
YNL040WP53960 RPS1BYML063W 768 nt3.74□□□□□ -1.81
YNL040WP53960 ECM8YBR076W 1065 nt3.74□□□□□ -1.81
YNL040WP53960 HCM1YCR065W 1695 nt3.74□□□□□ -1.81
YNL040WP53960 UBX5YDR330W 1503 nt3.74□□□□□ -1.81
YNL040WP53960 TAF12YDR145W 1620 nt3.73□□□□□ -1.81
YNL040WP53960 XRS2YDR369C 2565 nt3.73□□□□□ -1.81
YNL040WP53960 MSD1YPL104W 1977 nt3.73□□□□□ -1.81
YNL040WP53960 IRC25YLR021W 540 nt3.73□□□□□ -1.81
YNL040WP53960 HMX1YLR205C 954 nt3.73□□□□□ -1.81
YNL040WP53960 NCE103YNL036W 666 nt3.73□□□□□ -1.81
YNL040WP53960 NGL3YML118W 1518 nt3.73□□□□□ -1.81
YNL040WP53960 HER2YMR293C 1395 nt3.73□□□□□ -1.81
YNL040WP53960 SLA1YBL007C 3735 nt3.73□□□□□ -1.81
YNL040WP53960 PTR3YFR029W 2037 nt3.73□□□□□ -1.81
YNL040WP53960 RRN6YBL014C 2685 nt3.72□□□□□ -1.81
YNL040WP53960 GPB1YOR371C 2694 nt3.72□□□□□ -1.81
YNL040WP53960 BCH2YKR027W 2298 nt3.72□□□□□ -1.81
YNL040WP53960 TAF1YGR274C 3201 nt3.72□□□□□ -1.81
YNL040WP53960 YGL193CYGL193C 312 nt3.72□□□□□ -1.81
YNL040WP53960 DSE3YOR264W 1293 nt3.72□□□□□ -1.81
YNL040WP53960 YBR134WYBR134W 402 nt3.72□□□□□ -1.81
YNL040WP53960 GPI10YGL142C 1851 nt3.72□□□□□ -1.81
YNL040WP53960 SAT4YCR008W 1812 nt3.72□□□□□ -1.81
YNL040WP53960 RSC3YDR303C 2658 nt3.71□□□□□ -1.82
YNL040WP53960 AAD3YCR107W 1092 nt3.71□□□□□ -1.82
YNL040WP53960 PHO13YDL236W 939 nt3.71□□□□□ -1.82
YNL040WP53960 YGR015CYGR015C 987 nt3.71□□□□□ -1.82
YNL040WP53960 YGR273CYGR273C 525 nt3.71□□□□□ -1.82
YNL040WP53960 AAD10YJR155W 867 nt3.71□□□□□ -1.82
YNL040WP53960 PSR1YLL010C 1284 nt3.71□□□□□ -1.82
YNL040WP53960 PPA2YMR267W 933 nt3.71□□□□□ -1.82
YNL040WP53960 RIB4YOL143C 510 nt3.71□□□□□ -1.82
YNL040WP53960 YPL168WYPL168W 1293 nt3.71□□□□□ -1.82
YNL040WP53960 OSH2YDL019C 3852 nt3.71□□□□□ -1.82
YNL040WP53960 MIH1YMR036C 1665 nt3.71□□□□□ -1.82
YNL040WP53960 SIP1YDR422C 2448 nt3.7□□□□□ -1.82
YNL040WP53960 YER147C-AYER147C-A 411 nt3.7□□□□□ -1.82
YNL040WP53960 YIL152WYIL152W 708 nt3.7□□□□□ -1.82
YNL040WP53960 AIM26YKL037W 357 nt3.7□□□□□ -1.82
YNL040WP53960 UPS2YLR168C 693 nt3.7□□□□□ -1.82
YNL040WP53960 RIM11YMR139W 1113 nt3.7□□□□□ -1.82
YNL040WP53960 CMR3YPR013C 954 nt3.7□□□□□ -1.82
YNL040WP53960 RKM3YBR030W 1659 nt3.69□□□□□ -1.82
YNL040WP53960 OPT2YPR194C 2634 nt3.69□□□□□ -1.82
YNL040WP53960 COX4YGL187C 468 nt3.69□□□□□ -1.82
YNL040WP53960 FOL2YGR267C 732 nt3.69□□□□□ -1.82
YNL040WP53960 tV(CAC)DtV(CAC)D 73 nt3.69□□□□□ -1.82
YNL040WP53960 tV(CAC)HtV(CAC)H 73 nt3.69□□□□□ -1.82
YNL040WP53960 YAE1YJR067C 426 nt3.69□□□□□ -1.82
YNL040WP53960 TMA19YKL056C 504 nt3.69□□□□□ -1.82
YNL040WP53960 ATG8YBL078C 354 nt3.69□□□□□ -1.82
YNL040WP53960 LDS2YOL047C 1071 nt3.69□□□□□ -1.82
YNL040WP53960 YPR174CYPR174C 666 nt3.69□□□□□ -1.82
YNL040WP53960 TRM13YOL125W 1431 nt3.69□□□□□ -1.82
YNL040WP53960 YLR352WYLR352W 2424 nt3.69□□□□□ -1.82
YNL040WP53960 RIM4YHL024W 2142 nt3.68□□□□□ -1.82
YNL040WP53960 ATG21YPL100W 1491 nt3.68□□□□□ -1.82
YNL040WP53960 YER077CYER077C 2067 nt3.68□□□□□ -1.82
YNL040WP53960 RPS14AYCR031C 414 nt3.68□□□□□ -1.82
YNL040WP53960 COS7YDL248W 1152 nt3.68□□□□□ -1.82
YNL040WP53960 VMA22YHR060W 546 nt3.68□□□□□ -1.82
YNL040WP53960 SNL1YIL016W 480 nt3.68□□□□□ -1.82
YNL040WP53960 YIL047C-AYIL047C-A 369 nt3.68□□□□□ -1.82
YNL040WP53960 COS5YJR161C 1152 nt3.68□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms