Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUBP1P53384 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUBP1P53384 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.06■■□□□ 1.12
NUBP1P53384 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUBP1P53384 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.05■■□□□ 1.12
NUBP1P53384 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
NUBP1P53384 AL158047.1-201ENST00000445918 881 ntBASIC22.05■■□□□ 1.12
NUBP1P53384 AC010141.3-201ENST00000456659 717 ntBASIC22.05■■□□□ 1.12
NUBP1P53384 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.05■■□□□ 1.12
NUBP1P53384 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.05■■□□□ 1.12
NUBP1P53384 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.05■■□□□ 1.12
NUBP1P53384 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
NUBP1P53384 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
NUBP1P53384 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.05■■□□□ 1.12
NUBP1P53384 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NUBP1P53384 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUBP1P53384 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NUBP1P53384 FAM210CP-201ENST00000445714 574 ntBASIC22.04■■□□□ 1.12
NUBP1P53384 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.04■■□□□ 1.12
NUBP1P53384 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NUBP1P53384 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NUBP1P53384 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.03■■□□□ 1.12
NUBP1P53384 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NUBP1P53384 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NUBP1P53384 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.03■■□□□ 1.12
NUBP1P53384 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.03■■□□□ 1.12
NUBP1P53384 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.03■■□□□ 1.12
NUBP1P53384 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.03■■□□□ 1.12
NUBP1P53384 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
NUBP1P53384 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.03■■□□□ 1.12
NUBP1P53384 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NUBP1P53384 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NUBP1P53384 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.02■■□□□ 1.12
NUBP1P53384 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
NUBP1P53384 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
NUBP1P53384 KRT18P20-201ENST00000548986 1279 ntBASIC22.02■■□□□ 1.12
NUBP1P53384 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.02■■□□□ 1.12
NUBP1P53384 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.02■■□□□ 1.12
NUBP1P53384 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NUBP1P53384 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
NUBP1P53384 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.02■■□□□ 1.12
NUBP1P53384 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NUBP1P53384 AC144652.1-201ENST00000609974 1624 ntBASIC22.02■■□□□ 1.11
NUBP1P53384 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUBP1P53384 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.01■■□□□ 1.11
NUBP1P53384 MKRN4P-201ENST00000444706 1521 ntBASIC22.01■■□□□ 1.11
NUBP1P53384 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NUBP1P53384 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NUBP1P53384 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.01■■□□□ 1.11
NUBP1P53384 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
NUBP1P53384 AC010536.3-201ENST00000620306 533 ntBASIC22.01■■□□□ 1.11
NUBP1P53384 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 UNC93B4-201ENST00000505679 747 ntBASIC22■■□□□ 1.11
NUBP1P53384 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC22■■□□□ 1.11
NUBP1P53384 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22■■□□□ 1.11
NUBP1P53384 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22■■□□□ 1.11
NUBP1P53384 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22■■□□□ 1.11
NUBP1P53384 AP001160.3-201ENST00000601484 763 ntBASIC22■■□□□ 1.11
NUBP1P53384 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22■■□□□ 1.11
NUBP1P53384 OR10C1-204ENST00000622521 1039 ntBASIC22■■□□□ 1.11
NUBP1P53384 AC013268.1-206ENST00000638368 961 ntBASIC22■■□□□ 1.11
NUBP1P53384 AC112229.1-201ENST00000639295 961 ntBASIC22■■□□□ 1.11
NUBP1P53384 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22■■□□□ 1.11
NUBP1P53384 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NUBP1P53384 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NUBP1P53384 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUBP1P53384 AC009237.3-201ENST00000393279 1427 ntBASIC21.99■■□□□ 1.11
NUBP1P53384 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.99■■□□□ 1.11
NUBP1P53384 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUBP1P53384 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NUBP1P53384 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUBP1P53384 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NUBP1P53384 AL512625.2-201ENST00000417533 625 ntBASIC21.99■■□□□ 1.11
NUBP1P53384 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.99■■□□□ 1.11
NUBP1P53384 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.99■■□□□ 1.11
NUBP1P53384 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.99■■□□□ 1.11
NUBP1P53384 AP001002.2-201ENST00000625137 386 ntBASIC21.99■■□□□ 1.11
NUBP1P53384 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.99■■□□□ 1.11
NUBP1P53384 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
NUBP1P53384 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NUBP1P53384 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NUBP1P53384 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.98■■□□□ 1.11
NUBP1P53384 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NUBP1P53384 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.98■■□□□ 1.11
NUBP1P53384 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.98■■□□□ 1.11
NUBP1P53384 AC128676.1-201ENST00000454392 318 ntBASIC21.98■■□□□ 1.11
NUBP1P53384 AC008550.1-201ENST00000511500 884 ntBASIC21.98■■□□□ 1.11
NUBP1P53384 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.98■■□□□ 1.11
NUBP1P53384 AC073912.3-201ENST00000624414 853 ntBASIC21.98■■□□□ 1.11
NUBP1P53384 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NUBP1P53384 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NUBP1P53384 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NUBP1P53384 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NUBP1P53384 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms