Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
POLR2JP52435 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
POLR2JP52435 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.94■□□□□ 0.94
POLR2JP52435 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
POLR2JP52435 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 AC021242.3-201ENST00000607598 1377 ntBASIC20.94■□□□□ 0.94
POLR2JP52435 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
POLR2JP52435 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2JP52435 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR2JP52435 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR2JP52435 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR2JP52435 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR2JP52435 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
POLR2JP52435 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR2JP52435 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR2JP52435 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR2JP52435 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR2JP52435 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR2JP52435 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
POLR2JP52435 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR2JP52435 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 FAM99A-202ENST00000538190 1989 ntBASIC20.92■□□□□ 0.94
POLR2JP52435 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR2JP52435 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR2JP52435 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR2JP52435 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR2JP52435 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR2JP52435 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 AC026310.3-201ENST00000625186 2373 ntBASIC20.92■□□□□ 0.94
POLR2JP52435 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2JP52435 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2JP52435 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2JP52435 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR2JP52435 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR2JP52435 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR2JP52435 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.9■□□□□ 0.94
POLR2JP52435 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR2JP52435 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR2JP52435 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR2JP52435 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
POLR2JP52435 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR2JP52435 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR2JP52435 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2JP52435 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR2JP52435 AC004687.1-201ENST00000579003 1625 ntBASIC20.89■□□□□ 0.94
POLR2JP52435 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.89■□□□□ 0.94
POLR2JP52435 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
POLR2JP52435 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
POLR2JP52435 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
POLR2JP52435 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
POLR2JP52435 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2JP52435 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2JP52435 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2JP52435 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2JP52435 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2JP52435 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
POLR2JP52435 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2JP52435 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR2JP52435 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR2JP52435 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR2JP52435 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR2JP52435 BX664725.1-201ENST00000438252 379 ntBASIC20.88■□□□□ 0.93
POLR2JP52435 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR2JP52435 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.88■□□□□ 0.93
POLR2JP52435 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR2JP52435 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
POLR2JP52435 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.87■□□□□ 0.93
POLR2JP52435 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR2JP52435 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR2JP52435 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR2JP52435 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2JP52435 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR2JP52435 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms