Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 GAT2YMR136W 1683 nt5.12□□□□□ -1.59
TY4A-JP47023 THI21YPL258C 1656 nt5.12□□□□□ -1.59
TY4A-JP47023 SSB1YDL229W 1842 nt5.11□□□□□ -1.59
TY4A-JP47023 YHR202WYHR202W 1809 nt5.11□□□□□ -1.59
TY4A-JP47023 SSB2YNL209W 1842 nt5.11□□□□□ -1.59
TY4A-JP47023 UBP10YNL186W 2379 nt5.11□□□□□ -1.59
TY4A-JP47023 RPL35BYDL136W 363 nt5.11□□□□□ -1.59
TY4A-JP47023 DOG2YHR043C 741 nt5.11□□□□□ -1.59
TY4A-JP47023 DOG1YHR044C 741 nt5.11□□□□□ -1.59
TY4A-JP47023 YIL025CYIL025C 375 nt5.11□□□□□ -1.59
TY4A-JP47023 RRP15YPR143W 753 nt5.11□□□□□ -1.59
TY4A-JP47023 YDR261W-AYDR261W-A 1317 nt5.11□□□□□ -1.59
TY4A-JP47023 FDC1YDR539W 1512 nt5.11□□□□□ -1.59
TY4A-JP47023 MGS1YNL218W 1764 nt5.11□□□□□ -1.59
TY4A-JP47023 YCL076WYCL076W 744 nt5.1□□□□□ -1.59
TY4A-JP47023 GPM2YDL021W 936 nt5.1□□□□□ -1.59
TY4A-JP47023 YDR134CYDR134C 411 nt5.1□□□□□ -1.59
TY4A-JP47023 PAL1YDR348C 1500 nt5.1□□□□□ -1.59
TY4A-JP47023 RPL22BYFL034C-A 369 nt5.1□□□□□ -1.59
TY4A-JP47023 MIG1YGL035C 1515 nt5.1□□□□□ -1.59
TY4A-JP47023 YGL132WYGL132W 336 nt5.1□□□□□ -1.59
TY4A-JP47023 YRB30YGL164C 1323 nt5.1□□□□□ -1.59
TY4A-JP47023 YAP1YML007W 1953 nt5.1□□□□□ -1.59
TY4A-JP47023 MCH4YOL119C 1506 nt5.1□□□□□ -1.59
TY4A-JP47023 YOR338WYOR338W 1092 nt5.1□□□□□ -1.59
TY4A-JP47023 CDC15YAR019C 2925 nt5.1□□□□□ -1.59
TY4A-JP47023 DSS1YMR287C 2910 nt5.1□□□□□ -1.59
TY4A-JP47023 SSH4YKL124W 1740 nt5.09□□□□□ -1.59
TY4A-JP47023 TDA6YPR157W 1404 nt5.09□□□□□ -1.59
TY4A-JP47023 VAC17YCL063W 1272 nt5.09□□□□□ -1.59
TY4A-JP47023 snR83snR83 306 nt5.09□□□□□ -1.59
TY4A-JP47023 DET1YDR051C 1005 nt5.09□□□□□ -1.59
TY4A-JP47023 SPI1YER150W 447 nt5.09□□□□□ -1.59
TY4A-JP47023 YER187WYER187W 426 nt5.09□□□□□ -1.59
TY4A-JP47023 MF(ALPHA)2YGL089C 363 nt5.09□□□□□ -1.59
TY4A-JP47023 PIR3YKL163W 978 nt5.09□□□□□ -1.59
TY4A-JP47023 YLR202CYLR202C 327 nt5.09□□□□□ -1.59
TY4A-JP47023 SUB1YMR039C 879 nt5.09□□□□□ -1.59
TY4A-JP47023 UAF30YOR295W 687 nt5.09□□□□□ -1.59
TY4A-JP47023 TYE7YOR344C 876 nt5.09□□□□□ -1.59
TY4A-JP47023 CDC4YFL009W 2340 nt5.09□□□□□ -1.59
TY4A-JP47023 HOT1YMR172W 2160 nt5.09□□□□□ -1.59
TY4A-JP47023 NOP58YOR310C 1536 nt5.08□□□□□ -1.6
TY4A-JP47023 NAM9YNL137C 1461 nt5.08□□□□□ -1.6
TY4A-JP47023 SHE9YDR393W 1371 nt5.08□□□□□ -1.6
TY4A-JP47023 YIG1YPL201C 1386 nt5.08□□□□□ -1.6
TY4A-JP47023 SNU23YDL098C 585 nt5.08□□□□□ -1.6
TY4A-JP47023 YEL010WYEL010W 351 nt5.08□□□□□ -1.6
TY4A-JP47023 NPY1YGL067W 1155 nt5.08□□□□□ -1.6
TY4A-JP47023 COX4YGL187C 468 nt5.08□□□□□ -1.6
TY4A-JP47023 PFS1YHR185C 714 nt5.08□□□□□ -1.6
TY4A-JP47023 VPS20YMR077C 666 nt5.08□□□□□ -1.6
TY4A-JP47023 YPR074W-AYPR074W-A 171 nt5.08□□□□□ -1.6
TY4A-JP47023 PUS1YPL212C 1635 nt5.08□□□□□ -1.6
TY4A-JP47023 CTK1YKL139W 1587 nt5.08□□□□□ -1.6
TY4A-JP47023 BCK2YER167W 2556 nt5.08□□□□□ -1.6
TY4A-JP47023 RNA14YMR061W 2034 nt5.07□□□□□ -1.6
TY4A-JP47023 TPS3YMR261C 3165 nt5.07□□□□□ -1.6
TY4A-JP47023 RAD54YGL163C 2697 nt5.07□□□□□ -1.6
TY4A-JP47023 AAD4YDL243C 990 nt5.07□□□□□ -1.6
TY4A-JP47023 TAF10YDR167W 621 nt5.07□□□□□ -1.6
TY4A-JP47023 YGL117WYGL117W 798 nt5.07□□□□□ -1.6
TY4A-JP47023 LST7YGR057C 729 nt5.07□□□□□ -1.6
TY4A-JP47023 YKL162CYKL162C 1209 nt5.07□□□□□ -1.6
TY4A-JP47023 YMR158C-AYMR158C-A 138 nt5.07□□□□□ -1.6
TY4A-JP47023 END3YNL084C 1050 nt5.07□□□□□ -1.6
TY4A-JP47023 YPT53YNL093W 663 nt5.07□□□□□ -1.6
TY4A-JP47023 YGK3YOL128C 1128 nt5.07□□□□□ -1.6
TY4A-JP47023 snR11snR11 258 nt5.07□□□□□ -1.6
TY4A-JP47023 SER1YOR184W 1188 nt5.07□□□□□ -1.6
TY4A-JP47023 YAR1YPL239W 603 nt5.07□□□□□ -1.6
TY4A-JP47023 IMD3YLR432W 1572 nt5.07□□□□□ -1.6
TY4A-JP47023 NUP133YKR082W 3474 nt5.07□□□□□ -1.6
TY4A-JP47023 PAN1YIR006C 4443 nt5.07□□□□□ -1.6
TY4A-JP47023 ERD1YDR414C 1089 nt5.06□□□□□ -1.6
TY4A-JP47023 RPL34AYER056C-A 366 nt5.06□□□□□ -1.6
TY4A-JP47023 CWC23YGL128C 852 nt5.06□□□□□ -1.6
TY4A-JP47023 YHL049CYHL049C 816 nt5.06□□□□□ -1.6
TY4A-JP47023 COX6YHR051W 447 nt5.06□□□□□ -1.6
TY4A-JP47023 ATP14YLR295C 375 nt5.06□□□□□ -1.6
TY4A-JP47023 RPA49YNL248C 1248 nt5.06□□□□□ -1.6
TY4A-JP47023 YPR153WYPR153W 423 nt5.06□□□□□ -1.6
TY4A-JP47023 NMD3YHR170W 1557 nt5.06□□□□□ -1.6
TY4A-JP47023 STE7YDL159W 1548 nt5.06□□□□□ -1.6
TY4A-JP47023 GLO3YER122C 1482 nt5.06□□□□□ -1.6
TY4A-JP47023 OSH2YDL019C 3852 nt5.05□□□□□ -1.6
TY4A-JP47023 ULA1YPL003W 1389 nt5.05□□□□□ -1.6
TY4A-JP47023 YGL138CYGL138C 1038 nt5.05□□□□□ -1.6
TY4A-JP47023 YPT32YGL210W 669 nt5.05□□□□□ -1.6
TY4A-JP47023 PRP18YGR006W 756 nt5.05□□□□□ -1.6
TY4A-JP47023 CAB2YIL083C 1098 nt5.05□□□□□ -1.6
TY4A-JP47023 YKL123WYKL123W 381 nt5.05□□□□□ -1.6
TY4A-JP47023 LEM3YNL323W 1245 nt5.05□□□□□ -1.6
TY4A-JP47023 RPC34YNR003C 954 nt5.05□□□□□ -1.6
TY4A-JP47023 snR10snR10 245 nt5.05□□□□□ -1.6
TY4A-JP47023 NUF2YOL069W 1356 nt5.04□□□□□ -1.6
TY4A-JP47023 TIF4632YGL049C 2745 nt5.04□□□□□ -1.6
TY4A-JP47023 APP1YNL094W 1764 nt5.04□□□□□ -1.6
TY4A-JP47023 PST1YDR055W 1335 nt5.04□□□□□ -1.6
TY4A-JP47023 UBC9YDL064W 474 nt5.04□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms