Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 SRP40YKR092C 1221 nt4.23□□□□□ -1.73
RTR1P40084 NSE1YLR007W 1011 nt4.23□□□□□ -1.73
RTR1P40084 UIP3YAR027W 708 nt4.23□□□□□ -1.73
RTR1P40084 SHH3YMR118C 591 nt4.23□□□□□ -1.73
RTR1P40084 HUT1YPL244C 1020 nt4.23□□□□□ -1.73
RTR1P40084 SNT1YCR033W 3681 nt4.23□□□□□ -1.73
RTR1P40084 PUB1YNL016W 1362 nt4.23□□□□□ -1.73
RTR1P40084 OCT1YKL134C 2319 nt4.23□□□□□ -1.73
RTR1P40084 THI22YPR121W 1719 nt4.23□□□□□ -1.73
RTR1P40084 VPS30YPL120W 1674 nt4.22□□□□□ -1.73
RTR1P40084 YER077CYER077C 2067 nt4.22□□□□□ -1.73
RTR1P40084 YER085CYER085C 522 nt4.22□□□□□ -1.73
RTR1P40084 ERJ5YFR041C 888 nt4.22□□□□□ -1.73
RTR1P40084 YGL214WYGL214W 486 nt4.22□□□□□ -1.73
RTR1P40084 tV(CAC)DtV(CAC)D 73 nt4.22□□□□□ -1.73
RTR1P40084 tV(CAC)HtV(CAC)H 73 nt4.22□□□□□ -1.73
RTR1P40084 YIL152WYIL152W 708 nt4.22□□□□□ -1.73
RTR1P40084 YNL320WYNL320W 855 nt4.22□□□□□ -1.73
RTR1P40084 SPT23YKL020C 3249 nt4.21□□□□□ -1.73
RTR1P40084 TFA1YKL028W 1449 nt4.21□□□□□ -1.73
RTR1P40084 THR4YCR053W 1545 nt4.21□□□□□ -1.73
RTR1P40084 AGE2YIL044C 897 nt4.21□□□□□ -1.74
RTR1P40084 GOT1YMR292W 417 nt4.21□□□□□ -1.74
RTR1P40084 NAT3YPR131C 588 nt4.21□□□□□ -1.74
RTR1P40084 RDH54YBR073W 2877 nt4.21□□□□□ -1.74
RTR1P40084 RAD26YJR035W 3258 nt4.21□□□□□ -1.74
RTR1P40084 YGL140CYGL140C 3660 nt4.21□□□□□ -1.74
RTR1P40084 YGR079WYGR079W 1113 nt4.2□□□□□ -1.74
RTR1P40084 YGR291CYGR291C 222 nt4.2□□□□□ -1.74
RTR1P40084 WSS1YHR134W 810 nt4.2□□□□□ -1.74
RTR1P40084 YAL004WYAL004W 648 nt4.2□□□□□ -1.74
RTR1P40084 ANB1YJR047C 474 nt4.2□□□□□ -1.74
RTR1P40084 YBR298C-AYBR298C-A 222 nt4.2□□□□□ -1.74
RTR1P40084 VID27YNL212W 2349 nt4.2□□□□□ -1.74
RTR1P40084 BDP1YNL039W 1785 nt4.19□□□□□ -1.74
RTR1P40084 SUI3YPL237W 858 nt4.19□□□□□ -1.74
RTR1P40084 HST1YOL068C 1512 nt4.19□□□□□ -1.74
RTR1P40084 HCM1YCR065W 1695 nt4.19□□□□□ -1.74
RTR1P40084 NUP133YKR082W 3474 nt4.19□□□□□ -1.74
RTR1P40084 ENT1YDL161W 1365 nt4.18□□□□□ -1.74
RTR1P40084 STV1YMR054W 2673 nt4.18□□□□□ -1.74
RTR1P40084 tK(UUU)DtK(UUU)D 73 nt4.18□□□□□ -1.74
RTR1P40084 tK(UUU)G1tK(UUU)G1 73 nt4.18□□□□□ -1.74
RTR1P40084 tK(UUU)G2tK(UUU)G2 73 nt4.18□□□□□ -1.74
RTR1P40084 tK(UUU)KtK(UUU)K 73 nt4.18□□□□□ -1.74
RTR1P40084 tK(UUU)LtK(UUU)L 73 nt4.18□□□□□ -1.74
RTR1P40084 tK(UUU)OtK(UUU)O 73 nt4.18□□□□□ -1.74
RTR1P40084 tK(UUU)PtK(UUU)P 73 nt4.18□□□□□ -1.74
RTR1P40084 YMR085WYMR085W 1299 nt4.18□□□□□ -1.74
RTR1P40084 RAD17YOR368W 1206 nt4.18□□□□□ -1.74
RTR1P40084 SRS2YJL092W 3525 nt4.18□□□□□ -1.74
RTR1P40084 RPS1BYML063W 768 nt4.17□□□□□ -1.74
RTR1P40084 FAA1YOR317W 2103 nt4.17□□□□□ -1.74
RTR1P40084 SPA2YLL021W 4401 nt4.17□□□□□ -1.74
RTR1P40084 URA2YJL130C 6645 nt4.17□□□□□ -1.74
RTR1P40084 RGP1YDR137W 1992 nt4.16□□□□□ -1.74
RTR1P40084 UBP6YFR010W 1500 nt4.16□□□□□ -1.74
RTR1P40084 PTR3YFR029W 2037 nt4.16□□□□□ -1.74
RTR1P40084 STU2YLR045C 2667 nt4.16□□□□□ -1.74
RTR1P40084 YDL183CYDL183C 963 nt4.16□□□□□ -1.74
RTR1P40084 ELO3YLR372W 1038 nt4.16□□□□□ -1.74
RTR1P40084 CUZ1YNL155W 825 nt4.16□□□□□ -1.74
RTR1P40084 RTT109YLL002W 1311 nt4.16□□□□□ -1.74
RTR1P40084 PKH1YDR490C 2301 nt4.16□□□□□ -1.74
RTR1P40084 NAM2YLR382C 2685 nt4.16□□□□□ -1.74
RTR1P40084 YTA7YGR270W 4140 nt4.15□□□□□ -1.74
RTR1P40084 SMF1YOL122C 1728 nt4.15□□□□□ -1.74
RTR1P40084 FMP25YLR077W 1752 nt4.15□□□□□ -1.74
RTR1P40084 PHO13YDL236W 939 nt4.15□□□□□ -1.75
RTR1P40084 RPA43YOR340C 981 nt4.15□□□□□ -1.75
RTR1P40084 snR37snR37 386 nt4.15□□□□□ -1.75
RTR1P40084 REC8YPR007C 2043 nt4.15□□□□□ -1.75
RTR1P40084 NUP159YIL115C 4383 nt4.15□□□□□ -1.75
RTR1P40084 HOS2YGL194C 1359 nt4.14□□□□□ -1.75
RTR1P40084 ARG5,6YER069W 2592 nt4.14□□□□□ -1.75
RTR1P40084 GGA1YDR358W 1674 nt4.14□□□□□ -1.75
RTR1P40084 PAU10YDR542W 363 nt4.14□□□□□ -1.75
RTR1P40084 YER067C-AYER067C-A 324 nt4.14□□□□□ -1.75
RTR1P40084 PAU11YGL261C 363 nt4.14□□□□□ -1.75
RTR1P40084 PAU13YHL046C 363 nt4.14□□□□□ -1.75
RTR1P40084 AAD10YJR155W 867 nt4.14□□□□□ -1.75
RTR1P40084 SWC7YLR385C 399 nt4.14□□□□□ -1.75
RTR1P40084 PAU4YLR461W 363 nt4.14□□□□□ -1.75
RTR1P40084 TPP1YMR156C 717 nt4.14□□□□□ -1.75
RTR1P40084 IDI1YPL117C 867 nt4.14□□□□□ -1.75
RTR1P40084 NIP7YPL211W 546 nt4.14□□□□□ -1.75
RTR1P40084 BCK2YER167W 2556 nt4.14□□□□□ -1.75
RTR1P40084 DXO1YDR370C 1329 nt4.14□□□□□ -1.75
RTR1P40084 YCR050CYCR050C 309 nt4.13□□□□□ -1.75
RTR1P40084 PSF1YDR013W 627 nt4.13□□□□□ -1.75
RTR1P40084 YFR045WYFR045W 930 nt4.13□□□□□ -1.75
RTR1P40084 ECM34YHL043W 513 nt4.13□□□□□ -1.75
RTR1P40084 YIR043CYIR043C 693 nt4.13□□□□□ -1.75
RTR1P40084 RPL19BYBL027W 570 nt4.13□□□□□ -1.75
RTR1P40084 YPL168WYPL168W 1293 nt4.13□□□□□ -1.75
RTR1P40084 GSC2YGR032W 5688 nt4.13□□□□□ -1.75
RTR1P40084 UGA3YDL170W 1587 nt4.12□□□□□ -1.75
RTR1P40084 NUG1YER006W 1563 nt4.12□□□□□ -1.75
RTR1P40084 FAP7YDL166C 594 nt4.12□□□□□ -1.75
RTR1P40084 YDR526CYDR526C 471 nt4.12□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms