Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ITM2C-210ENST00000620962 501 ntBASIC27.29■■□□□ 1.96
KCNA3P22001 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
KCNA3P22001 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
KCNA3P22001 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.29■■□□□ 1.96
KCNA3P22001 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNA3P22001 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
KCNA3P22001 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNA3P22001 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
KCNA3P22001 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNA3P22001 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.28■■□□□ 1.96
KCNA3P22001 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNA3P22001 UBE2DNL-204ENST00000602536 740 ntBASIC27.28■■□□□ 1.96
KCNA3P22001 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.28■■□□□ 1.96
KCNA3P22001 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNA3P22001 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KCNA3P22001 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
KCNA3P22001 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
KCNA3P22001 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
KCNA3P22001 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.27■■□□□ 1.96
KCNA3P22001 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
KCNA3P22001 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KCNA3P22001 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
KCNA3P22001 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.27■■□□□ 1.96
KCNA3P22001 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC27.27■■□□□ 1.96
KCNA3P22001 AC068587.7-201ENST00000641602 218 ntBASIC27.27■■□□□ 1.96
KCNA3P22001 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
KCNA3P22001 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KCNA3P22001 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KCNA3P22001 PRORSD1P-201ENST00000295112 541 ntBASIC27.26■■□□□ 1.95
KCNA3P22001 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.26■■□□□ 1.95
KCNA3P22001 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.26■■□□□ 1.95
KCNA3P22001 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.26■■□□□ 1.95
KCNA3P22001 AL121749.1-202ENST00000609313 2153 ntBASIC27.26■■□□□ 1.95
KCNA3P22001 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
KCNA3P22001 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KCNA3P22001 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.25■■□□□ 1.95
KCNA3P22001 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
KCNA3P22001 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KCNA3P22001 CNN2P6-201ENST00000439038 900 ntBASIC27.25■■□□□ 1.95
KCNA3P22001 AC010141.3-201ENST00000456659 717 ntBASIC27.25■■□□□ 1.95
KCNA3P22001 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.25■■□□□ 1.95
KCNA3P22001 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.25■■□□□ 1.95
KCNA3P22001 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
KCNA3P22001 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
KCNA3P22001 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KCNA3P22001 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.24■■□□□ 1.95
KCNA3P22001 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
KCNA3P22001 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KCNA3P22001 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KCNA3P22001 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.23■■□□□ 1.95
KCNA3P22001 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
KCNA3P22001 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KCNA3P22001 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KCNA3P22001 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
KCNA3P22001 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
KCNA3P22001 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
KCNA3P22001 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
KCNA3P22001 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.22■■□□□ 1.95
KCNA3P22001 AF201337.1-201ENST00000520239 748 ntBASIC27.22■■□□□ 1.95
KCNA3P22001 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.22■■□□□ 1.95
KCNA3P22001 AC133552.2-202ENST00000575694 574 ntBASIC27.22■■□□□ 1.95
KCNA3P22001 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.22■■□□□ 1.95
KCNA3P22001 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.22■■□□□ 1.95
KCNA3P22001 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
KCNA3P22001 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
KCNA3P22001 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
KCNA3P22001 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
KCNA3P22001 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.21■■□□□ 1.95
KCNA3P22001 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
KCNA3P22001 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
KCNA3P22001 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
KCNA3P22001 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
KCNA3P22001 BRI3-207ENST00000539286 699 ntTSL 2 BASIC27.2■■□□□ 1.94
KCNA3P22001 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
KCNA3P22001 AC105036.2-201ENST00000569468 176 ntBASIC27.2■■□□□ 1.94
KCNA3P22001 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
KCNA3P22001 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
KCNA3P22001 AC004687.1-201ENST00000579003 1625 ntBASIC27.19■■□□□ 1.94
KCNA3P22001 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
KCNA3P22001 RPS2P52-201ENST00000469610 820 ntBASIC27.19■■□□□ 1.94
KCNA3P22001 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.19■■□□□ 1.94
KCNA3P22001 MYCNOS-205ENST00000641950 531 ntBASIC27.19■■□□□ 1.94
KCNA3P22001 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
KCNA3P22001 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.19■■□□□ 1.94
KCNA3P22001 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
KCNA3P22001 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
KCNA3P22001 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
KCNA3P22001 KRT87P-202ENST00000534226 1464 ntBASIC27.19■■□□□ 1.94
KCNA3P22001 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms