Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTLA4P16410 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTLA4P16410 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTLA4P16410 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
CTLA4P16410 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.46■□□□□ 0.71
CTLA4P16410 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.46■□□□□ 0.71
CTLA4P16410 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTLA4P16410 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTLA4P16410 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CTLA4P16410 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CTLA4P16410 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CTLA4P16410 AC137767.1-201ENST00000602918 1920 ntBASIC19.45■□□□□ 0.7
CTLA4P16410 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTLA4P16410 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTLA4P16410 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTLA4P16410 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTLA4P16410 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.45■□□□□ 0.7
CTLA4P16410 AC099791.2-201ENST00000605725 427 ntBASIC19.45■□□□□ 0.7
CTLA4P16410 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.45■□□□□ 0.7
CTLA4P16410 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTLA4P16410 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.45■□□□□ 0.7
CTLA4P16410 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.45■□□□□ 0.7
CTLA4P16410 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.44■□□□□ 0.7
CTLA4P16410 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.44■□□□□ 0.7
CTLA4P16410 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.44■□□□□ 0.7
CTLA4P16410 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CTLA4P16410 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.44■□□□□ 0.7
CTLA4P16410 AL356441.2-201ENST00000443009 864 ntBASIC19.44■□□□□ 0.7
CTLA4P16410 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.44■□□□□ 0.7
CTLA4P16410 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTLA4P16410 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.44■□□□□ 0.7
CTLA4P16410 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTLA4P16410 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTLA4P16410 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTLA4P16410 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTLA4P16410 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.43■□□□□ 0.7
CTLA4P16410 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTLA4P16410 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.43■□□□□ 0.7
CTLA4P16410 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CTLA4P16410 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.43■□□□□ 0.7
CTLA4P16410 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.43■□□□□ 0.7
CTLA4P16410 AL512631.2-201ENST00000604634 923 ntBASIC19.43■□□□□ 0.7
CTLA4P16410 pRNA.6-201ENST00000610482 90 ntBASIC19.43■□□□□ 0.7
CTLA4P16410 pRNA.5-201ENST00000612139 90 ntBASIC19.43■□□□□ 0.7
CTLA4P16410 pRNA.11-201ENST00000618423 90 ntBASIC19.43■□□□□ 0.7
CTLA4P16410 pRNA.13-201ENST00000619112 90 ntBASIC19.43■□□□□ 0.7
CTLA4P16410 C11orf96-202ENST00000528572 1834 ntBASIC19.43■□□□□ 0.7
CTLA4P16410 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTLA4P16410 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTLA4P16410 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTLA4P16410 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTLA4P16410 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTLA4P16410 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
CTLA4P16410 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTLA4P16410 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.42■□□□□ 0.7
CTLA4P16410 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
CTLA4P16410 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.42■□□□□ 0.7
CTLA4P16410 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
CTLA4P16410 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTLA4P16410 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTLA4P16410 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.41■□□□□ 0.7
CTLA4P16410 AC133637.1-201ENST00000624115 1537 ntBASIC19.41■□□□□ 0.7
CTLA4P16410 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.41■□□□□ 0.7
CTLA4P16410 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTLA4P16410 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTLA4P16410 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTLA4P16410 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.41■□□□□ 0.7
CTLA4P16410 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CTLA4P16410 CA15P2-201ENST00000611168 834 ntBASIC19.41■□□□□ 0.7
CTLA4P16410 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTLA4P16410 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTLA4P16410 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.41■□□□□ 0.7
CTLA4P16410 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTLA4P16410 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms