Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCK1P16333 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
NCK1P16333 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.66■□□□□ 0.9
NCK1P16333 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.66■□□□□ 0.9
NCK1P16333 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NCK1P16333 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCK1P16333 LINC01960-201ENST00000563759 1884 ntBASIC20.66■□□□□ 0.9
NCK1P16333 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.65■□□□□ 0.9
NCK1P16333 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.65■□□□□ 0.9
NCK1P16333 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCK1P16333 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCK1P16333 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCK1P16333 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCK1P16333 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.64■□□□□ 0.9
NCK1P16333 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.64■□□□□ 0.9
NCK1P16333 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCK1P16333 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NCK1P16333 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCK1P16333 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
NCK1P16333 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCK1P16333 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCK1P16333 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.64■□□□□ 0.89
NCK1P16333 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.64■□□□□ 0.89
NCK1P16333 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.64■□□□□ 0.89
NCK1P16333 HSD17B1P1-201ENST00000590052 955 ntBASIC20.64■□□□□ 0.89
NCK1P16333 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCK1P16333 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NCK1P16333 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
NCK1P16333 LINC01529-204ENST00000636474 1715 ntBASIC20.64■□□□□ 0.89
NCK1P16333 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCK1P16333 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NCK1P16333 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.63■□□□□ 0.89
NCK1P16333 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.63■□□□□ 0.89
NCK1P16333 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.63■□□□□ 0.89
NCK1P16333 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.63■□□□□ 0.89
NCK1P16333 SNX5-217ENST00000606557 1087 ntBASIC20.63■□□□□ 0.89
NCK1P16333 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCK1P16333 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCK1P16333 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
NCK1P16333 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCK1P16333 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.63■□□□□ 0.89
NCK1P16333 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.63■□□□□ 0.89
NCK1P16333 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NCK1P16333 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NCK1P16333 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NCK1P16333 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCK1P16333 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCK1P16333 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCK1P16333 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCK1P16333 AC010980.1-201ENST00000587192 1142 ntBASIC20.62■□□□□ 0.89
NCK1P16333 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCK1P16333 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.62■□□□□ 0.89
NCK1P16333 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.62■□□□□ 0.89
NCK1P16333 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.61■□□□□ 0.89
NCK1P16333 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NCK1P16333 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NCK1P16333 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCK1P16333 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCK1P16333 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NCK1P16333 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCK1P16333 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCK1P16333 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.6■□□□□ 0.89
NCK1P16333 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCK1P16333 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.6■□□□□ 0.89
NCK1P16333 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.6■□□□□ 0.89
NCK1P16333 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCK1P16333 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
NCK1P16333 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCK1P16333 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NCK1P16333 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.59■□□□□ 0.89
NCK1P16333 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.59■□□□□ 0.89
NCK1P16333 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms