Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
TRIM49CP0CI26 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM49CP0CI26 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
TRIM49CP0CI26 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM49CP0CI26 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM49CP0CI26 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49CP0CI26 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 UNC93B3-201ENST00000308076 687 ntBASIC23.81■■□□□ 1.4
TRIM49CP0CI26 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 AL138724.1-201ENST00000606771 1088 ntBASIC23.81■■□□□ 1.4
TRIM49CP0CI26 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM49CP0CI26 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 AC136469.2-201ENST00000623944 1028 ntBASIC23.8■■□□□ 1.4
TRIM49CP0CI26 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
TRIM49CP0CI26 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 AC011298.3-201ENST00000615796 283 ntBASIC23.79■■□□□ 1.4
TRIM49CP0CI26 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TRIM49CP0CI26 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 OR2I1P-207ENST00000453522 948 ntBASIC23.78■■□□□ 1.4
TRIM49CP0CI26 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRIM49CP0CI26 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 AC096631.2-201ENST00000436136 790 ntBASIC23.77■■□□□ 1.4
TRIM49CP0CI26 AC024257.2-201ENST00000549699 147 ntBASIC23.77■■□□□ 1.4
TRIM49CP0CI26 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 AL136162.1-201ENST00000607711 1078 ntBASIC23.77■■□□□ 1.4
TRIM49CP0CI26 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
TRIM49CP0CI26 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 AC139530.1-201ENST00000575312 1977 ntBASIC23.76■■□□□ 1.39
TRIM49CP0CI26 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 AC242852.2-201ENST00000615738 1807 ntBASIC23.76■■□□□ 1.39
TRIM49CP0CI26 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 AL031602.1-201ENST00000633169 911 ntBASIC23.76■■□□□ 1.39
TRIM49CP0CI26 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 AC137767.1-201ENST00000602918 1920 ntBASIC23.76■■□□□ 1.39
TRIM49CP0CI26 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRIM49CP0CI26 ECEL1P1-201ENST00000373592 1742 ntBASIC23.76■■□□□ 1.39
TRIM49CP0CI26 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms