Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.19■■■□□ 2.1
SNRPA1P09661 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SNRPA1P09661 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.19■■■□□ 2.1
SNRPA1P09661 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SNRPA1P09661 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.19■■■□□ 2.1
SNRPA1P09661 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
SNRPA1P09661 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SNRPA1P09661 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.18■■■□□ 2.1
SNRPA1P09661 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.18■■■□□ 2.1
SNRPA1P09661 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.18■■■□□ 2.1
SNRPA1P09661 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNRPA1P09661 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SNRPA1P09661 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNRPA1P09661 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SNRPA1P09661 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNRPA1P09661 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
SNRPA1P09661 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.17■■■□□ 2.1
SNRPA1P09661 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.17■■■□□ 2.1
SNRPA1P09661 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNRPA1P09661 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SNRPA1P09661 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNRPA1P09661 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNRPA1P09661 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.16■■■□□ 2.1
SNRPA1P09661 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.16■■■□□ 2.1
SNRPA1P09661 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
SNRPA1P09661 ANOS2P-203ENST00000472227 1816 ntBASIC28.16■■■□□ 2.1
SNRPA1P09661 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.16■■■□□ 2.1
SNRPA1P09661 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.16■■■□□ 2.1
SNRPA1P09661 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNRPA1P09661 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRPA1P09661 DUSP8P3-201ENST00000399571 1760 ntBASIC28.15■■■□□ 2.1
SNRPA1P09661 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRPA1P09661 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRPA1P09661 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC28.15■■■□□ 2.1
SNRPA1P09661 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SNRPA1P09661 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
SNRPA1P09661 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRPA1P09661 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.15■■■□□ 2.1
SNRPA1P09661 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.15■■■□□ 2.1
SNRPA1P09661 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.14■■■□□ 2.1
SNRPA1P09661 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SNRPA1P09661 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC28.14■■■□□ 2.1
SNRPA1P09661 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SNRPA1P09661 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC28.14■■■□□ 2.1
SNRPA1P09661 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC28.14■■■□□ 2.1
SNRPA1P09661 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC28.14■■■□□ 2.1
SNRPA1P09661 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
SNRPA1P09661 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.09
SNRPA1P09661 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SNRPA1P09661 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SNRPA1P09661 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNRPA1P09661 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNRPA1P09661 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.13■■■□□ 2.09
SNRPA1P09661 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNRPA1P09661 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNRPA1P09661 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.13■■■□□ 2.09
SNRPA1P09661 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
SNRPA1P09661 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC28.13■■■□□ 2.09
SNRPA1P09661 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.13■■■□□ 2.09
SNRPA1P09661 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC28.13■■■□□ 2.09
SNRPA1P09661 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.13■■■□□ 2.09
SNRPA1P09661 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNRPA1P09661 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNRPA1P09661 AC092068.2-201ENST00000590491 1708 ntBASIC28.12■■■□□ 2.09
SNRPA1P09661 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SNRPA1P09661 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.12■■■□□ 2.09
SNRPA1P09661 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.12■■■□□ 2.09
SNRPA1P09661 GALNS-213ENST00000569433 723 ntTSL 3 BASIC28.12■■■□□ 2.09
SNRPA1P09661 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.12■■■□□ 2.09
SNRPA1P09661 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNRPA1P09661 AP004607.4-201ENST00000530158 1459 ntBASIC28.12■■■□□ 2.09
SNRPA1P09661 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.12■■■□□ 2.09
SNRPA1P09661 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNRPA1P09661 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNRPA1P09661 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNRPA1P09661 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNRPA1P09661 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNRPA1P09661 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.11■■■□□ 2.09
SNRPA1P09661 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNRPA1P09661 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SNRPA1P09661 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNRPA1P09661 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.1■■■□□ 2.09
SNRPA1P09661 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.1■■■□□ 2.09
SNRPA1P09661 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNRPA1P09661 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.1■■■□□ 2.09
SNRPA1P09661 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SNRPA1P09661 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC28.09■■■□□ 2.09
SNRPA1P09661 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SNRPA1P09661 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.09■■■□□ 2.09
SNRPA1P09661 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
SNRPA1P09661 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC28.08■■■□□ 2.09
SNRPA1P09661 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNRPA1P09661 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNRPA1P09661 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SNRPA1P09661 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.08■■■□□ 2.09
SNRPA1P09661 AC006015.1-201ENST00000429970 570 ntBASIC28.08■■■□□ 2.09
SNRPA1P09661 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNRPA1P09661 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.08■■■□□ 2.09
SNRPA1P09661 AC004854.2-201ENST00000608450 1441 ntBASIC28.08■■■□□ 2.09
SNRPA1P09661 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms