Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.43■■□□□ 1.18
COL4A2P08572 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.43■■□□□ 1.18
COL4A2P08572 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A2P08572 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A2P08572 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.42■■□□□ 1.18
COL4A2P08572 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
COL4A2P08572 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A2P08572 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
COL4A2P08572 KRT18P11-201ENST00000435214 1283 ntBASIC22.42■■□□□ 1.18
COL4A2P08572 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.42■■□□□ 1.18
COL4A2P08572 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.42■■□□□ 1.18
COL4A2P08572 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.42■■□□□ 1.18
COL4A2P08572 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A2P08572 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A2P08572 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
COL4A2P08572 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.41■■□□□ 1.18
COL4A2P08572 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.41■■□□□ 1.18
COL4A2P08572 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.41■■□□□ 1.18
COL4A2P08572 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.41■■□□□ 1.18
COL4A2P08572 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A2P08572 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL4A2P08572 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL4A2P08572 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.4■■□□□ 1.18
COL4A2P08572 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL4A2P08572 KRT87P-202ENST00000534226 1464 ntBASIC22.4■■□□□ 1.18
COL4A2P08572 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.4■■□□□ 1.18
COL4A2P08572 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL4A2P08572 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.4■■□□□ 1.18
COL4A2P08572 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.4■■□□□ 1.18
COL4A2P08572 UBE2DNL-204ENST00000602536 740 ntBASIC22.4■■□□□ 1.18
COL4A2P08572 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL4A2P08572 AC005224.4-201ENST00000583262 1652 ntBASIC22.39■■□□□ 1.18
COL4A2P08572 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.39■■□□□ 1.18
COL4A2P08572 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.39■■□□□ 1.17
COL4A2P08572 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.39■■□□□ 1.17
COL4A2P08572 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL4A2P08572 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.39■■□□□ 1.17
COL4A2P08572 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL4A2P08572 AC011767.1-201ENST00000617410 1153 ntBASIC22.39■■□□□ 1.17
COL4A2P08572 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL4A2P08572 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL4A2P08572 AC079140.4-201ENST00000507448 529 ntBASIC22.38■■□□□ 1.17
COL4A2P08572 AC142086.2-201ENST00000569753 217 ntBASIC22.38■■□□□ 1.17
COL4A2P08572 AC104187.1-201ENST00000607510 612 ntBASIC22.38■■□□□ 1.17
COL4A2P08572 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL4A2P08572 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL4A2P08572 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL4A2P08572 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL4A2P08572 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL4A2P08572 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.37■■□□□ 1.17
COL4A2P08572 LINC00543-201ENST00000567234 1845 ntBASIC22.37■■□□□ 1.17
COL4A2P08572 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL4A2P08572 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL4A2P08572 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.37■■□□□ 1.17
COL4A2P08572 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.37■■□□□ 1.17
COL4A2P08572 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.37■■□□□ 1.17
COL4A2P08572 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
COL4A2P08572 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.37■■□□□ 1.17
COL4A2P08572 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.37■■□□□ 1.17
COL4A2P08572 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.37■■□□□ 1.17
COL4A2P08572 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL4A2P08572 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.36■■□□□ 1.17
COL4A2P08572 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.36■■□□□ 1.17
COL4A2P08572 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.36■■□□□ 1.17
COL4A2P08572 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL4A2P08572 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
COL4A2P08572 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.36■■□□□ 1.17
COL4A2P08572 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.36■■□□□ 1.17
COL4A2P08572 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.36■■□□□ 1.17
COL4A2P08572 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
COL4A2P08572 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.36■■□□□ 1.17
COL4A2P08572 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL4A2P08572 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL4A2P08572 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL4A2P08572 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL4A2P08572 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL4A2P08572 DUX4L16-201ENST00000555130 1264 ntBASIC22.35■■□□□ 1.17
COL4A2P08572 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.35■■□□□ 1.17
COL4A2P08572 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL4A2P08572 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL4A2P08572 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
COL4A2P08572 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL4A2P08572 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL4A2P08572 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL4A2P08572 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.35■■□□□ 1.17
COL4A2P08572 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
COL4A2P08572 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
COL4A2P08572 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.34■■□□□ 1.17
COL4A2P08572 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.34■■□□□ 1.17
COL4A2P08572 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.34■■□□□ 1.17
COL4A2P08572 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms