Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MMP2P08253 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MMP2P08253 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
MMP2P08253 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
MMP2P08253 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
MMP2P08253 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.16■■□□□ 1.14
MMP2P08253 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
MMP2P08253 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.16■■□□□ 1.14
MMP2P08253 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.16■■□□□ 1.14
MMP2P08253 CA15P2-201ENST00000611168 834 ntBASIC22.16■■□□□ 1.14
MMP2P08253 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MMP2P08253 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
MMP2P08253 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MMP2P08253 GUSBP5-202ENST00000510805 1989 ntBASIC22.16■■□□□ 1.14
MMP2P08253 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.15■■□□□ 1.14
MMP2P08253 AL139246.5-201ENST00000606645 996 ntBASIC22.15■■□□□ 1.14
MMP2P08253 AL031432.3-201ENST00000607698 485 ntBASIC22.15■■□□□ 1.14
MMP2P08253 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.15■■□□□ 1.14
MMP2P08253 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.15■■□□□ 1.14
MMP2P08253 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 AC080038.3-201ENST00000623346 1952 ntBASIC22.15■■□□□ 1.14
MMP2P08253 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MMP2P08253 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.14■■□□□ 1.14
MMP2P08253 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
MMP2P08253 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MMP2P08253 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
MMP2P08253 AC137767.1-201ENST00000602918 1920 ntBASIC22.14■■□□□ 1.14
MMP2P08253 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
MMP2P08253 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MMP2P08253 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MMP2P08253 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MMP2P08253 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.13■■□□□ 1.13
MMP2P08253 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.13■■□□□ 1.13
MMP2P08253 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MMP2P08253 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.13■■□□□ 1.13
MMP2P08253 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
MMP2P08253 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
MMP2P08253 BX842568.3-201ENST00000418104 571 ntBASIC22.13■■□□□ 1.13
MMP2P08253 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MMP2P08253 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
MMP2P08253 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
MMP2P08253 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MMP2P08253 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MMP2P08253 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
MMP2P08253 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
MMP2P08253 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
MMP2P08253 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP2P08253 AL117328.2-201ENST00000624617 1940 ntBASIC22.12■■□□□ 1.13
MMP2P08253 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP2P08253 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP2P08253 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MMP2P08253 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
MMP2P08253 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP2P08253 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.11■■□□□ 1.13
MMP2P08253 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.11■■□□□ 1.13
MMP2P08253 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
MMP2P08253 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP2P08253 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP2P08253 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
MMP2P08253 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
MMP2P08253 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP2P08253 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.1■■□□□ 1.13
MMP2P08253 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP2P08253 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP2P08253 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP2P08253 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP2P08253 EDA-201ENST00000338901 1233 ntBASIC22.1■■□□□ 1.13
MMP2P08253 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MMP2P08253 AP001330.3-201ENST00000520123 633 ntBASIC22.1■■□□□ 1.13
MMP2P08253 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.1■■□□□ 1.13
MMP2P08253 AC233992.3-201ENST00000607491 485 ntBASIC22.1■■□□□ 1.13
MMP2P08253 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.1■■□□□ 1.13
MMP2P08253 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP2P08253 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP2P08253 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.09■■□□□ 1.13
MMP2P08253 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.09■■□□□ 1.13
MMP2P08253 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP2P08253 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP2P08253 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP2P08253 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP2P08253 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP2P08253 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP2P08253 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.09■■□□□ 1.13
MMP2P08253 AC133561.4-201ENST00000566112 224 ntBASIC22.09■■□□□ 1.13
MMP2P08253 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms