Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.42■■□□□ 1.34
RB1P06400 MFSD11-216ENST00000590393 1141 ntBASIC23.42■■□□□ 1.34
RB1P06400 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RB1P06400 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RB1P06400 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.42■■□□□ 1.34
RB1P06400 AC231657.2-201ENST00000624556 255 ntBASIC23.42■■□□□ 1.34
RB1P06400 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RB1P06400 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.42■■□□□ 1.34
RB1P06400 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RB1P06400 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RB1P06400 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.41■■□□□ 1.34
RB1P06400 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.41■■□□□ 1.34
RB1P06400 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RB1P06400 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.41■■□□□ 1.34
RB1P06400 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.41■■□□□ 1.34
RB1P06400 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RB1P06400 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
RB1P06400 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RB1P06400 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RB1P06400 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RB1P06400 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RB1P06400 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RB1P06400 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RB1P06400 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.4■■□□□ 1.34
RB1P06400 AC083906.2-201ENST00000511578 360 ntBASIC23.4■■□□□ 1.34
RB1P06400 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.4■■□□□ 1.34
RB1P06400 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RB1P06400 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RB1P06400 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
RB1P06400 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RB1P06400 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RB1P06400 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.39■■□□□ 1.33
RB1P06400 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RB1P06400 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RB1P06400 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RB1P06400 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.39■■□□□ 1.33
RB1P06400 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.39■■□□□ 1.33
RB1P06400 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RB1P06400 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RB1P06400 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.38■■□□□ 1.33
RB1P06400 TSPY6P-201ENST00000448518 926 ntBASIC23.38■■□□□ 1.33
RB1P06400 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.38■■□□□ 1.33
RB1P06400 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RB1P06400 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.38■■□□□ 1.33
RB1P06400 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RB1P06400 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RB1P06400 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RB1P06400 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RB1P06400 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.37■■□□□ 1.33
RB1P06400 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RB1P06400 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RB1P06400 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RB1P06400 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RB1P06400 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
RB1P06400 KRT18P6-201ENST00000555540 1265 ntBASIC23.36■■□□□ 1.33
RB1P06400 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RB1P06400 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RB1P06400 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.36■■□□□ 1.33
RB1P06400 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RB1P06400 AL050303.2-201ENST00000619798 666 ntBASIC23.36■■□□□ 1.33
RB1P06400 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.36■■□□□ 1.33
RB1P06400 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.36■■□□□ 1.33
RB1P06400 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RB1P06400 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RB1P06400 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RB1P06400 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RB1P06400 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RB1P06400 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.35■■□□□ 1.33
RB1P06400 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
RB1P06400 AC007322.1-201ENST00000426983 750 ntBASIC23.35■■□□□ 1.33
RB1P06400 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.35■■□□□ 1.33
RB1P06400 TSPY20P-201ENST00000450910 630 ntBASIC23.35■■□□□ 1.33
RB1P06400 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.35■■□□□ 1.33
RB1P06400 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.35■■□□□ 1.33
RB1P06400 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RB1P06400 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RB1P06400 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RB1P06400 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RB1P06400 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RB1P06400 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.34■■□□□ 1.33
RB1P06400 DUX4L16-201ENST00000555130 1264 ntBASIC23.34■■□□□ 1.33
RB1P06400 AC066615.1-201ENST00000640911 628 ntBASIC23.34■■□□□ 1.33
RB1P06400 KRT87P-202ENST00000534226 1464 ntBASIC23.34■■□□□ 1.33
RB1P06400 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RB1P06400 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.34■■□□□ 1.33
RB1P06400 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.33■■□□□ 1.33
RB1P06400 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.33■■□□□ 1.33
RB1P06400 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RB1P06400 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RB1P06400 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RB1P06400 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.33■■□□□ 1.33
RB1P06400 SLC7A5P2-201ENST00000553010 536 ntBASIC23.33■■□□□ 1.33
RB1P06400 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.33■■□□□ 1.33
RB1P06400 AC104187.1-201ENST00000607510 612 ntBASIC23.33■■□□□ 1.33
RB1P06400 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.33■■□□□ 1.33
RB1P06400 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RB1P06400 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RB1P06400 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.33■■□□□ 1.33
RB1P06400 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RB1P06400 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms