Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.23■■□□□ 1.79
APPP05067 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.23■■□□□ 1.79
APPP05067 AP005435.1-201ENST00000529293 1178 ntBASIC26.23■■□□□ 1.79
APPP05067 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.23■■□□□ 1.79
APPP05067 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.23■■□□□ 1.79
APPP05067 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
APPP05067 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
APPP05067 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.23■■□□□ 1.79
APPP05067 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
APPP05067 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APPP05067 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APPP05067 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.22■■□□□ 1.79
APPP05067 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.22■■□□□ 1.79
APPP05067 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
APPP05067 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
APPP05067 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
APPP05067 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
APPP05067 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.22■■□□□ 1.79
APPP05067 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APPP05067 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
APPP05067 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
APPP05067 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
APPP05067 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.21■■□□□ 1.79
APPP05067 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.21■■□□□ 1.79
APPP05067 IGHV3-19-201ENST00000521488 291 ntBASIC26.21■■□□□ 1.79
APPP05067 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.21■■□□□ 1.79
APPP05067 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
APPP05067 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.21■■□□□ 1.79
APPP05067 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
APPP05067 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
APPP05067 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
APPP05067 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
APPP05067 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
APPP05067 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.2■■□□□ 1.78
APPP05067 LINC01960-201ENST00000563759 1884 ntBASIC26.2■■□□□ 1.78
APPP05067 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
APPP05067 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
APPP05067 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
APPP05067 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
APPP05067 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.2■■□□□ 1.78
APPP05067 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.2■■□□□ 1.78
APPP05067 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.2■■□□□ 1.78
APPP05067 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.2■■□□□ 1.78
APPP05067 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.19■■□□□ 1.78
APPP05067 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.19■■□□□ 1.78
APPP05067 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
APPP05067 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
APPP05067 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.19■■□□□ 1.78
APPP05067 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.19■■□□□ 1.78
APPP05067 AL031602.1-201ENST00000633169 911 ntBASIC26.19■■□□□ 1.78
APPP05067 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.19■■□□□ 1.78
APPP05067 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
APPP05067 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
APPP05067 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
APPP05067 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
APPP05067 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.19■■□□□ 1.78
APPP05067 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
APPP05067 AC068587.7-201ENST00000641602 218 ntBASIC26.18■■□□□ 1.78
APPP05067 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
APPP05067 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
APPP05067 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
APPP05067 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
APPP05067 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
APPP05067 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
APPP05067 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
APPP05067 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.17■■□□□ 1.78
APPP05067 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.17■■□□□ 1.78
APPP05067 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
APPP05067 IRS3P-201ENST00000223076 1006 ntBASIC26.17■■□□□ 1.78
APPP05067 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.17■■□□□ 1.78
APPP05067 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.17■■□□□ 1.78
APPP05067 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
APPP05067 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
APPP05067 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.16■■□□□ 1.78
APPP05067 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.16■■□□□ 1.78
APPP05067 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.16■■□□□ 1.78
APPP05067 AC087239.1-201ENST00000622671 572 ntBASIC26.16■■□□□ 1.78
APPP05067 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.16■■□□□ 1.78
APPP05067 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
APPP05067 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
APPP05067 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.16■■□□□ 1.78
APPP05067 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.15■■□□□ 1.78
APPP05067 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
APPP05067 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
APPP05067 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
APPP05067 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
APPP05067 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
APPP05067 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.15■■□□□ 1.78
APPP05067 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.15■■□□□ 1.78
APPP05067 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.15■■□□□ 1.78
APPP05067 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.15■■□□□ 1.78
APPP05067 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms