Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND3P03897 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND3P03897 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND3P03897 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
MT-ND3P03897 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.24■■□□□ 1.15
MT-ND3P03897 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND3P03897 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND3P03897 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-ND3P03897 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.23■■□□□ 1.15
MT-ND3P03897 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.23■■□□□ 1.15
MT-ND3P03897 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.23■■□□□ 1.15
MT-ND3P03897 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-ND3P03897 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-ND3P03897 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.23■■□□□ 1.15
MT-ND3P03897 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND3P03897 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND3P03897 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND3P03897 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
MT-ND3P03897 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND3P03897 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND3P03897 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.22■■□□□ 1.15
MT-ND3P03897 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.22■■□□□ 1.15
MT-ND3P03897 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.22■■□□□ 1.15
MT-ND3P03897 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.22■■□□□ 1.15
MT-ND3P03897 AL356740.2-201ENST00000601559 647 ntBASIC22.22■■□□□ 1.15
MT-ND3P03897 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND3P03897 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
MT-ND3P03897 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.22■■□□□ 1.15
MT-ND3P03897 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND3P03897 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND3P03897 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND3P03897 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
MT-ND3P03897 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND3P03897 AL137060.1-201ENST00000618151 2648 ntBASIC22.21■■□□□ 1.15
MT-ND3P03897 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND3P03897 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND3P03897 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND3P03897 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.21■■□□□ 1.15
MT-ND3P03897 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND3P03897 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
MT-ND3P03897 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
MT-ND3P03897 AC087742.1-201ENST00000575880 1738 ntBASIC22.2■■□□□ 1.14
MT-ND3P03897 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
MT-ND3P03897 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND3P03897 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND3P03897 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND3P03897 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND3P03897 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND3P03897 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.19■■□□□ 1.14
MT-ND3P03897 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
MT-ND3P03897 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.19■■□□□ 1.14
MT-ND3P03897 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
MT-ND3P03897 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.19■■□□□ 1.14
MT-ND3P03897 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
MT-ND3P03897 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND3P03897 AL117332.1-201ENST00000622628 974 ntBASIC22.19■■□□□ 1.14
MT-ND3P03897 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
MT-ND3P03897 FBXW4P1-201ENST00000426721 2239 ntBASIC22.19■■□□□ 1.14
MT-ND3P03897 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND3P03897 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
MT-ND3P03897 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
MT-ND3P03897 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND3P03897 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND3P03897 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND3P03897 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
MT-ND3P03897 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.18■■□□□ 1.14
MT-ND3P03897 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.18■■□□□ 1.14
MT-ND3P03897 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.18■■□□□ 1.14
MT-ND3P03897 MIR3621-201ENST00000580529 85 ntBASIC22.18■■□□□ 1.14
MT-ND3P03897 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.18■■□□□ 1.14
MT-ND3P03897 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.18■■□□□ 1.14
MT-ND3P03897 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
MT-ND3P03897 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.18■■□□□ 1.14
MT-ND3P03897 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.18■■□□□ 1.14
MT-ND3P03897 AC144652.1-201ENST00000609974 1624 ntBASIC22.17■■□□□ 1.14
MT-ND3P03897 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.17■■□□□ 1.14
MT-ND3P03897 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
MT-ND3P03897 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND3P03897 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
MT-ND3P03897 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND3P03897 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND3P03897 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND3P03897 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND3P03897 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
MT-ND3P03897 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
MT-ND3P03897 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.16■■□□□ 1.14
MT-ND3P03897 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.16■■□□□ 1.14
MT-ND3P03897 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms