Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC080038.1-201ENST00000611274 1154 ntBASIC24.07■■□□□ 1.44
CHRNA1P02708 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHRNA1P02708 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHRNA1P02708 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.06■■□□□ 1.44
CHRNA1P02708 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.06■■□□□ 1.44
CHRNA1P02708 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.06■■□□□ 1.44
CHRNA1P02708 AC137761.2-201ENST00000561729 223 ntBASIC24.06■■□□□ 1.44
CHRNA1P02708 AC145350.3-201ENST00000569033 163 ntBASIC24.06■■□□□ 1.44
CHRNA1P02708 AC087239.1-201ENST00000622671 572 ntBASIC24.06■■□□□ 1.44
CHRNA1P02708 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHRNA1P02708 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHRNA1P02708 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CHRNA1P02708 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHRNA1P02708 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHRNA1P02708 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.05■■□□□ 1.44
CHRNA1P02708 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CHRNA1P02708 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.05■■□□□ 1.44
CHRNA1P02708 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.05■■□□□ 1.44
CHRNA1P02708 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.05■■□□□ 1.44
CHRNA1P02708 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.05■■□□□ 1.44
CHRNA1P02708 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHRNA1P02708 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.05■■□□□ 1.44
CHRNA1P02708 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHRNA1P02708 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHRNA1P02708 OXCT2P1-201ENST00000447263 1535 ntBASIC24.05■■□□□ 1.44
CHRNA1P02708 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
CHRNA1P02708 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.04■■□□□ 1.44
CHRNA1P02708 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CHRNA1P02708 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.04■■□□□ 1.44
CHRNA1P02708 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.04■■□□□ 1.44
CHRNA1P02708 RAP2CP1-201ENST00000605103 478 ntBASIC24.04■■□□□ 1.44
CHRNA1P02708 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHRNA1P02708 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.04■■□□□ 1.44
CHRNA1P02708 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHRNA1P02708 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHRNA1P02708 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHRNA1P02708 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHRNA1P02708 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CHRNA1P02708 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHRNA1P02708 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.03■■□□□ 1.44
CHRNA1P02708 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.03■■□□□ 1.44
CHRNA1P02708 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHRNA1P02708 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.03■■□□□ 1.44
CHRNA1P02708 AC016769.1-201ENST00000409132 1010 ntBASIC24.03■■□□□ 1.44
CHRNA1P02708 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
CHRNA1P02708 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.03■■□□□ 1.44
CHRNA1P02708 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHRNA1P02708 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.03■■□□□ 1.44
CHRNA1P02708 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHRNA1P02708 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHRNA1P02708 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHRNA1P02708 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.02■■□□□ 1.44
CHRNA1P02708 CDCA4P2-201ENST00000441182 718 ntBASIC24.02■■□□□ 1.44
CHRNA1P02708 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHRNA1P02708 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.02■■□□□ 1.44
CHRNA1P02708 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHRNA1P02708 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHRNA1P02708 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CHRNA1P02708 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHRNA1P02708 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHRNA1P02708 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.01■■□□□ 1.43
CHRNA1P02708 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.01■■□□□ 1.43
CHRNA1P02708 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.01■■□□□ 1.43
CHRNA1P02708 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.01■■□□□ 1.43
CHRNA1P02708 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHRNA1P02708 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHRNA1P02708 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CHRNA1P02708 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24■■□□□ 1.43
CHRNA1P02708 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CHRNA1P02708 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24■■□□□ 1.43
CHRNA1P02708 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24■■□□□ 1.43
CHRNA1P02708 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24■■□□□ 1.43
CHRNA1P02708 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHRNA1P02708 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24■■□□□ 1.43
CHRNA1P02708 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24■■□□□ 1.43
CHRNA1P02708 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24■■□□□ 1.43
CHRNA1P02708 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHRNA1P02708 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHRNA1P02708 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHRNA1P02708 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHRNA1P02708 DUSP8P3-201ENST00000399571 1760 ntBASIC23.99■■□□□ 1.43
CHRNA1P02708 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CHRNA1P02708 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.99■■□□□ 1.43
CHRNA1P02708 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHRNA1P02708 AC073111.5-205ENST00000641717 521 ntBASIC23.99■■□□□ 1.43
CHRNA1P02708 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHRNA1P02708 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHRNA1P02708 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CHRNA1P02708 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHRNA1P02708 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.98■■□□□ 1.43
CHRNA1P02708 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.98■■□□□ 1.43
CHRNA1P02708 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHRNA1P02708 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHRNA1P02708 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CHRNA1P02708 HLA-L-209ENST00000420110 1011 ntBASIC23.98■■□□□ 1.43
CHRNA1P02708 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.98■■□□□ 1.43
CHRNA1P02708 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.98■■□□□ 1.43
CHRNA1P02708 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.98■■□□□ 1.43
CHRNA1P02708 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.98■■□□□ 1.43
CHRNA1P02708 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms