Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PGK1P00558 ESRRAP2-201ENST00000418437 1549 ntBASIC24.62■■□□□ 1.53
PGK1P00558 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.62■■□□□ 1.53
PGK1P00558 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PGK1P00558 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PGK1P00558 AC010141.3-201ENST00000456659 717 ntBASIC24.62■■□□□ 1.53
PGK1P00558 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.62■■□□□ 1.53
PGK1P00558 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.62■■□□□ 1.53
PGK1P00558 AC068587.7-201ENST00000641602 218 ntBASIC24.62■■□□□ 1.53
PGK1P00558 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.62■■□□□ 1.53
PGK1P00558 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PGK1P00558 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.62■■□□□ 1.53
PGK1P00558 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PGK1P00558 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
PGK1P00558 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PGK1P00558 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PGK1P00558 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.61■■□□□ 1.53
PGK1P00558 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.61■■□□□ 1.53
PGK1P00558 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.61■■□□□ 1.53
PGK1P00558 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PGK1P00558 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.61■■□□□ 1.53
PGK1P00558 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.61■■□□□ 1.53
PGK1P00558 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.61■■□□□ 1.53
PGK1P00558 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PGK1P00558 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PGK1P00558 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.6■■□□□ 1.53
PGK1P00558 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PGK1P00558 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.6■■□□□ 1.53
PGK1P00558 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PGK1P00558 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PGK1P00558 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PGK1P00558 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
PGK1P00558 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.59■■□□□ 1.53
PGK1P00558 AC079140.4-201ENST00000507448 529 ntBASIC24.59■■□□□ 1.53
PGK1P00558 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PGK1P00558 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PGK1P00558 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PGK1P00558 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PGK1P00558 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.58■■□□□ 1.53
PGK1P00558 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PGK1P00558 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PGK1P00558 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PGK1P00558 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PGK1P00558 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PGK1P00558 AC087239.1-201ENST00000622671 572 ntBASIC24.58■■□□□ 1.53
PGK1P00558 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PGK1P00558 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PGK1P00558 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.58■■□□□ 1.52
PGK1P00558 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PGK1P00558 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PGK1P00558 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.57■■□□□ 1.52
PGK1P00558 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PGK1P00558 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PGK1P00558 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PGK1P00558 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.57■■□□□ 1.52
PGK1P00558 KRT18P11-201ENST00000435214 1283 ntBASIC24.57■■□□□ 1.52
PGK1P00558 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.57■■□□□ 1.52
PGK1P00558 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
PGK1P00558 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PGK1P00558 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.57■■□□□ 1.52
PGK1P00558 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PGK1P00558 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
PGK1P00558 GPX1P1-201ENST00000388829 606 ntBASIC24.56■■□□□ 1.52
PGK1P00558 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PGK1P00558 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.56■■□□□ 1.52
PGK1P00558 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PGK1P00558 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.55■■□□□ 1.52
PGK1P00558 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.55■■□□□ 1.52
PGK1P00558 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
PGK1P00558 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.55■■□□□ 1.52
PGK1P00558 AL353803.4-201ENST00000565882 1934 ntBASIC24.55■■□□□ 1.52
PGK1P00558 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PGK1P00558 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PGK1P00558 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.54■■□□□ 1.52
PGK1P00558 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PGK1P00558 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.54■■□□□ 1.52
PGK1P00558 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.54■■□□□ 1.52
PGK1P00558 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PGK1P00558 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.54■■□□□ 1.52
PGK1P00558 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PGK1P00558 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PGK1P00558 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.53■■□□□ 1.52
PGK1P00558 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.53■■□□□ 1.52
PGK1P00558 MFSD11-216ENST00000590393 1141 ntBASIC24.53■■□□□ 1.52
PGK1P00558 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.53■■□□□ 1.52
PGK1P00558 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGK1P00558 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PGK1P00558 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PGK1P00558 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGK1P00558 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGK1P00558 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.53■■□□□ 1.52
PGK1P00558 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PGK1P00558 OXCT2P1-201ENST00000447263 1535 ntBASIC24.52■■□□□ 1.52
PGK1P00558 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PGK1P00558 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PGK1P00558 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PGK1P00558 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PGK1P00558 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGK1P00558 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGK1P00558 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms