Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.09■□□□□ 0.33
TOMM40O96008 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.09■□□□□ 0.33
TOMM40O96008 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.09■□□□□ 0.33
TOMM40O96008 AC007375.3-201ENST00000600936 2314 ntBASIC17.09■□□□□ 0.33
TOMM40O96008 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TOMM40O96008 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TOMM40O96008 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOMM40O96008 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOMM40O96008 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOMM40O96008 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TOMM40O96008 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOMM40O96008 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOMM40O96008 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TOMM40O96008 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOMM40O96008 AC009102.2-201ENST00000606772 1639 ntBASIC17.08■□□□□ 0.32
TOMM40O96008 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TOMM40O96008 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TOMM40O96008 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TOMM40O96008 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TOMM40O96008 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TOMM40O96008 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOMM40O96008 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.08■□□□□ 0.32
TOMM40O96008 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
TOMM40O96008 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOMM40O96008 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.08■□□□□ 0.32
TOMM40O96008 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TOMM40O96008 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TOMM40O96008 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOMM40O96008 AC080038.3-201ENST00000623346 1952 ntBASIC17.08■□□□□ 0.32
TOMM40O96008 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TOMM40O96008 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TOMM40O96008 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TOMM40O96008 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOMM40O96008 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TOMM40O96008 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.07■□□□□ 0.32
TOMM40O96008 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.07■□□□□ 0.32
TOMM40O96008 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOMM40O96008 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.07■□□□□ 0.32
TOMM40O96008 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.07■□□□□ 0.32
TOMM40O96008 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOMM40O96008 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOMM40O96008 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.07■□□□□ 0.32
TOMM40O96008 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.07■□□□□ 0.32
TOMM40O96008 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TOMM40O96008 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOMM40O96008 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TOMM40O96008 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOMM40O96008 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOMM40O96008 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.07■□□□□ 0.32
TOMM40O96008 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.07■□□□□ 0.32
TOMM40O96008 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.07■□□□□ 0.32
TOMM40O96008 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.06■□□□□ 0.32
TOMM40O96008 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TOMM40O96008 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.06■□□□□ 0.32
TOMM40O96008 AC010997.5-201ENST00000609182 354 ntBASIC17.06■□□□□ 0.32
TOMM40O96008 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOMM40O96008 LINC01960-201ENST00000563759 1884 ntBASIC17.05■□□□□ 0.32
TOMM40O96008 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 C11orf96-202ENST00000528572 1834 ntBASIC17.05■□□□□ 0.32
TOMM40O96008 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TOMM40O96008 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.05■□□□□ 0.32
TOMM40O96008 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOMM40O96008 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TOMM40O96008 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.05■□□□□ 0.32
TOMM40O96008 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.05■□□□□ 0.32
TOMM40O96008 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOMM40O96008 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOMM40O96008 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.04■□□□□ 0.32
TOMM40O96008 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOMM40O96008 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOMM40O96008 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOMM40O96008 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOMM40O96008 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms