Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM4BO94953 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
KDM4BO94953 SNX5-217ENST00000606557 1087 ntBASIC19.13■□□□□ 0.65
KDM4BO94953 AC137630.3-201ENST00000607245 391 ntBASIC19.13■□□□□ 0.65
KDM4BO94953 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.13■□□□□ 0.65
KDM4BO94953 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDM4BO94953 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDM4BO94953 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
KDM4BO94953 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM4BO94953 AL121603.2-201ENST00000557373 2117 ntBASIC19.13■□□□□ 0.65
KDM4BO94953 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KDM4BO94953 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM4BO94953 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM4BO94953 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
KDM4BO94953 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
KDM4BO94953 C11orf96-202ENST00000528572 1834 ntBASIC19.12■□□□□ 0.65
KDM4BO94953 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.12■□□□□ 0.65
KDM4BO94953 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.12■□□□□ 0.65
KDM4BO94953 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.12■□□□□ 0.65
KDM4BO94953 AL031848.2-201ENST00000607670 837 ntBASIC19.12■□□□□ 0.65
KDM4BO94953 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
KDM4BO94953 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM4BO94953 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KDM4BO94953 AC080038.3-201ENST00000623346 1952 ntBASIC19.12■□□□□ 0.65
KDM4BO94953 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
KDM4BO94953 AC092053.2-201ENST00000640557 1818 ntBASIC19.11■□□□□ 0.65
KDM4BO94953 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KDM4BO94953 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM4BO94953 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KDM4BO94953 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM4BO94953 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.11■□□□□ 0.65
KDM4BO94953 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KDM4BO94953 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM4BO94953 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM4BO94953 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KDM4BO94953 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
KDM4BO94953 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KDM4BO94953 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.1■□□□□ 0.65
KDM4BO94953 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.1■□□□□ 0.65
KDM4BO94953 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 RNF165-205ENST00000588679 2904 ntBASIC19.1■□□□□ 0.65
KDM4BO94953 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM4BO94953 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KDM4BO94953 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM4BO94953 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM4BO94953 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.09■□□□□ 0.65
KDM4BO94953 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.09■□□□□ 0.65
KDM4BO94953 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM4BO94953 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.09■□□□□ 0.65
KDM4BO94953 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KDM4BO94953 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.09■□□□□ 0.65
KDM4BO94953 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.09■□□□□ 0.65
KDM4BO94953 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KDM4BO94953 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM4BO94953 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
KDM4BO94953 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.09■□□□□ 0.65
KDM4BO94953 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
KDM4BO94953 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
KDM4BO94953 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KDM4BO94953 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KDM4BO94953 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.08■□□□□ 0.65
KDM4BO94953 FBXW4P1-201ENST00000426721 2239 ntBASIC19.08■□□□□ 0.65
KDM4BO94953 AL353803.4-201ENST00000565882 1934 ntBASIC19.08■□□□□ 0.65
KDM4BO94953 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
KDM4BO94953 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KDM4BO94953 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KDM4BO94953 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KDM4BO94953 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.08■□□□□ 0.64
KDM4BO94953 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KDM4BO94953 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KDM4BO94953 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
KDM4BO94953 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.07■□□□□ 0.64
KDM4BO94953 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.07■□□□□ 0.64
KDM4BO94953 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KDM4BO94953 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KDM4BO94953 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.07■□□□□ 0.64
KDM4BO94953 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.07■□□□□ 0.64
KDM4BO94953 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.07■□□□□ 0.64
KDM4BO94953 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms