Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PTP4A3O75365 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PTP4A3O75365 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTP4A3O75365 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PTP4A3O75365 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTP4A3O75365 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.76■□□□□ 0.75
PTP4A3O75365 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.76■□□□□ 0.75
PTP4A3O75365 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTP4A3O75365 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTP4A3O75365 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.76■□□□□ 0.75
PTP4A3O75365 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.76■□□□□ 0.75
PTP4A3O75365 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTP4A3O75365 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTP4A3O75365 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTP4A3O75365 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTP4A3O75365 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTP4A3O75365 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PTP4A3O75365 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTP4A3O75365 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.75■□□□□ 0.75
PTP4A3O75365 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.75■□□□□ 0.75
PTP4A3O75365 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTP4A3O75365 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTP4A3O75365 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTP4A3O75365 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.74■□□□□ 0.75
PTP4A3O75365 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTP4A3O75365 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTP4A3O75365 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTP4A3O75365 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.74■□□□□ 0.75
PTP4A3O75365 UNC93B8-201ENST00000511903 705 ntBASIC19.74■□□□□ 0.75
PTP4A3O75365 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.74■□□□□ 0.75
PTP4A3O75365 MIR6724-1-201ENST00000616420 92 ntBASIC19.74■□□□□ 0.75
PTP4A3O75365 MIR6724-2-201ENST00000616483 92 ntBASIC19.74■□□□□ 0.75
PTP4A3O75365 MIR6724-4-201ENST00000617390 92 ntBASIC19.74■□□□□ 0.75
PTP4A3O75365 MIR6724-3-201ENST00000622482 92 ntBASIC19.74■□□□□ 0.75
PTP4A3O75365 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTP4A3O75365 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.74■□□□□ 0.75
PTP4A3O75365 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTP4A3O75365 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.74■□□□□ 0.75
PTP4A3O75365 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTP4A3O75365 FBXW4P1-201ENST00000426721 2239 ntBASIC19.74■□□□□ 0.75
PTP4A3O75365 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PTP4A3O75365 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PTP4A3O75365 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.73■□□□□ 0.75
PTP4A3O75365 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
PTP4A3O75365 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTP4A3O75365 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.73■□□□□ 0.75
PTP4A3O75365 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PTP4A3O75365 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A3O75365 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.72■□□□□ 0.75
PTP4A3O75365 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PTP4A3O75365 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A3O75365 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
PTP4A3O75365 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A3O75365 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A3O75365 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A3O75365 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A3O75365 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.71■□□□□ 0.75
PTP4A3O75365 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.71■□□□□ 0.75
PTP4A3O75365 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
PTP4A3O75365 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PTP4A3O75365 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.71■□□□□ 0.75
PTP4A3O75365 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.71■□□□□ 0.75
PTP4A3O75365 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTP4A3O75365 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.71■□□□□ 0.75
PTP4A3O75365 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A3O75365 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A3O75365 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTP4A3O75365 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A3O75365 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.7■□□□□ 0.74
PTP4A3O75365 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A3O75365 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms