Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX5O60225 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX5O60225 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX5O60225 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SSX5O60225 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 RARRES2P2-201ENST00000394842 485 ntBASIC18.69■□□□□ 0.58
SSX5O60225 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
SSX5O60225 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX5O60225 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSX5O60225 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.68■□□□□ 0.58
SSX5O60225 AC026310.3-201ENST00000625186 2373 ntBASIC18.68■□□□□ 0.58
SSX5O60225 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 AC144652.1-201ENST00000609974 1624 ntBASIC18.68■□□□□ 0.58
SSX5O60225 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.68■□□□□ 0.58
SSX5O60225 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.68■□□□□ 0.58
SSX5O60225 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.68■□□□□ 0.58
SSX5O60225 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SSX5O60225 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX5O60225 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSX5O60225 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX5O60225 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX5O60225 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
SSX5O60225 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX5O60225 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SSX5O60225 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX5O60225 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.67■□□□□ 0.58
SSX5O60225 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX5O60225 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX5O60225 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX5O60225 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SSX5O60225 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX5O60225 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSX5O60225 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX5O60225 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.67■□□□□ 0.58
SSX5O60225 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSX5O60225 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SSX5O60225 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SSX5O60225 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.66■□□□□ 0.58
SSX5O60225 AC139795.1-202ENST00000500444 432 ntBASIC18.66■□□□□ 0.58
SSX5O60225 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 THA1P-201ENST00000590384 1145 ntBASIC18.66■□□□□ 0.58
SSX5O60225 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SSX5O60225 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX5O60225 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SSX5O60225 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX5O60225 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX5O60225 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 KRT18P24-201ENST00000344739 1156 ntBASIC18.65■□□□□ 0.58
SSX5O60225 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
SSX5O60225 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
SSX5O60225 DUX4L18-201ENST00000553347 1267 ntBASIC18.65■□□□□ 0.58
SSX5O60225 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX5O60225 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX5O60225 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX5O60225 AC010542.4-201ENST00000563151 1910 ntBASIC18.64■□□□□ 0.58
SSX5O60225 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSX5O60225 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX5O60225 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX5O60225 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSX5O60225 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SSX5O60225 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX5O60225 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX5O60225 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SSX5O60225 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX5O60225 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms