Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLOCKO15516 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.72■□□□□ 0.91
CLOCKO15516 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLOCKO15516 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLOCKO15516 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLOCKO15516 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLOCKO15516 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.71■□□□□ 0.91
CLOCKO15516 AC026310.3-201ENST00000625186 2373 ntBASIC20.71■□□□□ 0.91
CLOCKO15516 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 AC022616.5-201ENST00000518796 181 ntBASIC20.71■□□□□ 0.91
CLOCKO15516 AC011551.1-201ENST00000614101 683 ntBASIC20.71■□□□□ 0.91
CLOCKO15516 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLOCKO15516 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLOCKO15516 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLOCKO15516 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
CLOCKO15516 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
CLOCKO15516 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLOCKO15516 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.7■□□□□ 0.9
CLOCKO15516 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLOCKO15516 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLOCKO15516 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLOCKO15516 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLOCKO15516 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.7■□□□□ 0.9
CLOCKO15516 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CLOCKO15516 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLOCKO15516 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLOCKO15516 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLOCKO15516 AC087742.1-201ENST00000575880 1738 ntBASIC20.69■□□□□ 0.9
CLOCKO15516 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.69■□□□□ 0.9
CLOCKO15516 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLOCKO15516 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLOCKO15516 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLOCKO15516 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.68■□□□□ 0.9
CLOCKO15516 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.68■□□□□ 0.9
CLOCKO15516 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.68■□□□□ 0.9
CLOCKO15516 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLOCKO15516 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.68■□□□□ 0.9
CLOCKO15516 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLOCKO15516 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLOCKO15516 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLOCKO15516 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLOCKO15516 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.67■□□□□ 0.9
CLOCKO15516 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLOCKO15516 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.67■□□□□ 0.9
CLOCKO15516 AC239859.2-201ENST00000444165 318 ntBASIC20.67■□□□□ 0.9
CLOCKO15516 AL121603.2-201ENST00000557373 2117 ntBASIC20.67■□□□□ 0.9
CLOCKO15516 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.67■□□□□ 0.9
CLOCKO15516 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLOCKO15516 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLOCKO15516 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLOCKO15516 GUSBP5-201ENST00000418136 578 ntBASIC20.66■□□□□ 0.9
CLOCKO15516 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLOCKO15516 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLOCKO15516 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLOCKO15516 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLOCKO15516 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.65■□□□□ 0.9
CLOCKO15516 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CLOCKO15516 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLOCKO15516 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.65■□□□□ 0.9
CLOCKO15516 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLOCKO15516 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLOCKO15516 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLOCKO15516 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.64■□□□□ 0.9
CLOCKO15516 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
CLOCKO15516 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLOCKO15516 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CLOCKO15516 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLOCKO15516 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLOCKO15516 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLOCKO15516 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.64■□□□□ 0.89
CLOCKO15516 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLOCKO15516 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.64■□□□□ 0.89
CLOCKO15516 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.64■□□□□ 0.89
CLOCKO15516 AC131212.1-201ENST00000613771 668 ntBASIC20.64■□□□□ 0.89
CLOCKO15516 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.64■□□□□ 0.89
CLOCKO15516 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLOCKO15516 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLOCKO15516 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CLOCKO15516 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLOCKO15516 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.64■□□□□ 0.89
CLOCKO15516 AC073130.3-201ENST00000624389 2278 ntBASIC20.64■□□□□ 0.89
CLOCKO15516 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLOCKO15516 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLOCKO15516 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.63■□□□□ 0.89
CLOCKO15516 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLOCKO15516 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms