Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 BX005040.4-201ENST00000637145 1518 ntBASIC23.32■■□□□ 1.32
SYN3O14994 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.32■■□□□ 1.32
SYN3O14994 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYN3O14994 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYN3O14994 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.31■■□□□ 1.32
SYN3O14994 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYN3O14994 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYN3O14994 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.31■■□□□ 1.32
SYN3O14994 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYN3O14994 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SYN3O14994 NTF6G-201ENST00000591094 616 ntBASIC23.31■■□□□ 1.32
SYN3O14994 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.31■■□□□ 1.32
SYN3O14994 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SYN3O14994 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.3■■□□□ 1.32
SYN3O14994 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYN3O14994 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYN3O14994 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SYN3O14994 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.3■■□□□ 1.32
SYN3O14994 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SYN3O14994 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SYN3O14994 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SYN3O14994 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.3■■□□□ 1.32
SYN3O14994 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.3■■□□□ 1.32
SYN3O14994 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYN3O14994 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYN3O14994 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
SYN3O14994 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SYN3O14994 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.29■■□□□ 1.32
SYN3O14994 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SYN3O14994 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SYN3O14994 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SYN3O14994 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SYN3O14994 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SYN3O14994 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SYN3O14994 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.28■■□□□ 1.32
SYN3O14994 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SYN3O14994 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.28■■□□□ 1.32
SYN3O14994 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SYN3O14994 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.28■■□□□ 1.32
SYN3O14994 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.28■■□□□ 1.32
SYN3O14994 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.28■■□□□ 1.32
SYN3O14994 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SYN3O14994 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SYN3O14994 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.27■■□□□ 1.32
SYN3O14994 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SYN3O14994 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.27■■□□□ 1.32
SYN3O14994 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SYN3O14994 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SYN3O14994 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.27■■□□□ 1.32
SYN3O14994 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SYN3O14994 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SYN3O14994 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SYN3O14994 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SYN3O14994 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SYN3O14994 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.26■■□□□ 1.31
SYN3O14994 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SYN3O14994 IKBKGP1-201ENST00000612193 1073 ntBASIC23.26■■□□□ 1.31
SYN3O14994 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.26■■□□□ 1.31
SYN3O14994 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYN3O14994 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
SYN3O14994 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYN3O14994 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.25■■□□□ 1.31
SYN3O14994 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.25■■□□□ 1.31
SYN3O14994 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.25■■□□□ 1.31
SYN3O14994 AL137784.2-201ENST00000607332 1000 ntBASIC23.25■■□□□ 1.31
SYN3O14994 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.25■■□□□ 1.31
SYN3O14994 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYN3O14994 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYN3O14994 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SYN3O14994 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYN3O14994 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SYN3O14994 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SYN3O14994 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYN3O14994 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SYN3O14994 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.24■■□□□ 1.31
SYN3O14994 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYN3O14994 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYN3O14994 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SYN3O14994 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.23■■□□□ 1.31
SYN3O14994 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
SYN3O14994 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
SYN3O14994 AC092437.1-201ENST00000624794 1048 ntBASIC23.23■■□□□ 1.31
SYN3O14994 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.23■■□□□ 1.31
SYN3O14994 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.23■■□□□ 1.31
SYN3O14994 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYN3O14994 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SYN3O14994 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SYN3O14994 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYN3O14994 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYN3O14994 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYN3O14994 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SYN3O14994 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.22■■□□□ 1.31
SYN3O14994 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SYN3O14994 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.22■■□□□ 1.31
SYN3O14994 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYN3O14994 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.22■■□□□ 1.31
SYN3O14994 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.22■■□□□ 1.31
SYN3O14994 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.22■■□□□ 1.31
SYN3O14994 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SYN3O14994 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms