Protein–RNA interactions for Protein: D6R901

USP17L21, Ubiquitin carboxyl-terminal hydrolase 17-like protein 21, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L21D6R901 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
USP17L21D6R901 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.03■■□□□ 1.76
USP17L21D6R901 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.03■■□□□ 1.76
USP17L21D6R901 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP17L21D6R901 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.03■■□□□ 1.76
USP17L21D6R901 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP17L21D6R901 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
USP17L21D6R901 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.02■■□□□ 1.76
USP17L21D6R901 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 AC027612.3-201ENST00000413684 1047 ntBASIC26.02■■□□□ 1.76
USP17L21D6R901 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.02■■□□□ 1.76
USP17L21D6R901 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.02■■□□□ 1.76
USP17L21D6R901 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.02■■□□□ 1.76
USP17L21D6R901 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.02■■□□□ 1.76
USP17L21D6R901 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
USP17L21D6R901 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
USP17L21D6R901 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
USP17L21D6R901 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.01■■□□□ 1.75
USP17L21D6R901 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.01■■□□□ 1.75
USP17L21D6R901 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.01■■□□□ 1.75
USP17L21D6R901 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.01■■□□□ 1.75
USP17L21D6R901 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.01■■□□□ 1.75
USP17L21D6R901 YBX1P1-201ENST00000445822 960 ntBASIC26.01■■□□□ 1.75
USP17L21D6R901 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.01■■□□□ 1.75
USP17L21D6R901 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.01■■□□□ 1.75
USP17L21D6R901 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USP17L21D6R901 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26■■□□□ 1.75
USP17L21D6R901 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
USP17L21D6R901 ANKRD20A6P-201ENST00000618763 204 ntBASIC26■■□□□ 1.75
USP17L21D6R901 AC087239.1-201ENST00000622671 572 ntBASIC26■■□□□ 1.75
USP17L21D6R901 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USP17L21D6R901 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26■■□□□ 1.75
USP17L21D6R901 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
USP17L21D6R901 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
USP17L21D6R901 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP17L21D6R901 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
USP17L21D6R901 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
USP17L21D6R901 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.99■■□□□ 1.75
USP17L21D6R901 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
USP17L21D6R901 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.99■■□□□ 1.75
USP17L21D6R901 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.98■■□□□ 1.75
USP17L21D6R901 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USP17L21D6R901 OXCT2P1-201ENST00000447263 1535 ntBASIC25.98■■□□□ 1.75
USP17L21D6R901 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.97■■□□□ 1.75
USP17L21D6R901 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
USP17L21D6R901 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.97■■□□□ 1.75
USP17L21D6R901 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.97■■□□□ 1.75
USP17L21D6R901 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.97■■□□□ 1.75
USP17L21D6R901 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
USP17L21D6R901 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
USP17L21D6R901 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
USP17L21D6R901 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.97■■□□□ 1.75
USP17L21D6R901 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.97■■□□□ 1.75
USP17L21D6R901 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.97■■□□□ 1.75
USP17L21D6R901 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
USP17L21D6R901 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
USP17L21D6R901 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
USP17L21D6R901 LINC01960-201ENST00000563759 1884 ntBASIC25.96■■□□□ 1.75
USP17L21D6R901 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.96■■□□□ 1.75
USP17L21D6R901 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
USP17L21D6R901 AC123595.1-201ENST00000440769 1046 ntBASIC25.96■■□□□ 1.75
USP17L21D6R901 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
USP17L21D6R901 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
USP17L21D6R901 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.96■■□□□ 1.75
USP17L21D6R901 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
USP17L21D6R901 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
USP17L21D6R901 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.95■■□□□ 1.75
USP17L21D6R901 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
USP17L21D6R901 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
USP17L21D6R901 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
USP17L21D6R901 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.95■■□□□ 1.74
USP17L21D6R901 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
USP17L21D6R901 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
USP17L21D6R901 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
USP17L21D6R901 DUSP8P5-201ENST00000422884 1815 ntBASIC25.94■■□□□ 1.74
USP17L21D6R901 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.94■■□□□ 1.74
USP17L21D6R901 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
USP17L21D6R901 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
USP17L21D6R901 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.94■■□□□ 1.74
USP17L21D6R901 SMUG1P1-201ENST00000590640 811 ntBASIC25.94■■□□□ 1.74
USP17L21D6R901 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
USP17L21D6R901 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
USP17L21D6R901 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms