Protein–RNA interactions for Protein: A8MXY4

ZNF99, Zinc finger protein 99, humanhuman

Predicted RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF99A8MXY4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 AC004448.1-201ENST00000458332 883 ntBASIC20.22■□□□□ 0.83
ZNF99A8MXY4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF99A8MXY4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF99A8MXY4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
ZNF99A8MXY4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ZNF99A8MXY4 AC079630.1-202ENST00000618127 1840 ntBASIC20.2■□□□□ 0.82
ZNF99A8MXY4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.2■□□□□ 0.82
ZNF99A8MXY4 SNX5-217ENST00000606557 1087 ntBASIC20.2■□□□□ 0.82
ZNF99A8MXY4 AC092028.1-203ENST00000608262 953 ntBASIC20.2■□□□□ 0.82
ZNF99A8MXY4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF99A8MXY4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF99A8MXY4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF99A8MXY4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF99A8MXY4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF99A8MXY4 AC080038.3-201ENST00000623346 1952 ntBASIC20.17■□□□□ 0.82
ZNF99A8MXY4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF99A8MXY4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF99A8MXY4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF99A8MXY4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZNF99A8MXY4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms