Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 AC110285.6-201ENST00000617652 491 ntBASIC20.38■□□□□ 0.85
CLCA1A8K7I4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA1A8K7I4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA1A8K7I4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLCA1A8K7I4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 ALDH1A3-203ENST00000557963 1670 ntBASIC20.35■□□□□ 0.85
CLCA1A8K7I4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA1A8K7I4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 C11orf96-202ENST00000528572 1834 ntBASIC20.34■□□□□ 0.85
CLCA1A8K7I4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCA1A8K7I4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 AC092053.2-201ENST00000640557 1818 ntBASIC20.33■□□□□ 0.85
CLCA1A8K7I4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCA1A8K7I4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 AC009102.2-201ENST00000606772 1639 ntBASIC20.33■□□□□ 0.84
CLCA1A8K7I4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CLCA1A8K7I4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms