Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUSP8P3-201ENST00000399571 1760 ntBASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CENPVL3A0A0U1RRI6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4L2-201ENST00000561772 1275 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 CCDC92B-201ENST00000575506 885 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4L6-201ENST00000626483 1275 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4L1-201ENST00000627662 1275 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4L8-201ENST00000629013 1275 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4L3-201ENST00000630187 1275 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4L7-201ENST00000630678 1275 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DUX4L5-201ENST00000630834 1275 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 LINC02228-203ENST00000641970 1355 ntBASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CENPVL3A0A0U1RRI6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CENPVL3A0A0U1RRI6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CENPVL3A0A0U1RRI6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CENPVL3A0A0U1RRI6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CENPVL3A0A0U1RRI6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CENPVL3A0A0U1RRI6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CENPVL3A0A0U1RRI6 OXCT2P1-201ENST00000447263 1535 ntBASIC17.77■□□□□ 0.43
CENPVL3A0A0U1RRI6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CENPVL3A0A0U1RRI6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CENPVL3A0A0U1RRI6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.76■□□□□ 0.43
CENPVL3A0A0U1RRI6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 KRT18P14-201ENST00000534205 1250 ntBASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 TERF1P2-201ENST00000583350 1212 ntBASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CENPVL3A0A0U1RRI6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CENPVL3A0A0U1RRI6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPVL3A0A0U1RRI6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CENPVL3A0A0U1RRI6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
CENPVL3A0A0U1RRI6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CENPVL3A0A0U1RRI6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CENPVL3A0A0U1RRI6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms